Populus alba (white poplar): 118045996 Help Entry 118045996         CDS       T07314                                  Name (RefSeq) endoribonuclease Dicer homolog 3   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism palz  Populus alba (white poplar) Brite KEGG Orthology (KO) [BR:palz00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:palz03036]     118045996 Chromosome and associated proteins [BR:palz03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     118045996    microRNA pathway     RISC loading complex      118045996 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD Helicase_C ResIII PAZ DND1_DSRM SWI2_SNF2 SNF2-rel_dom AAA_22 Motif Other DBs NCBI-GeneID:  118045996 NCBI-ProteinID:  XP_034910632 LinkDB All DBs Position 18:complement(4708508..4722598) Genome browser AA seq 1685 aa AA seqDB search MDTAMPDRDSLKRSFGDMMVNNNSSSSCLAIDTSNCITDQNDTTPQGLASVLSNHKEFYP RGYQSKVFEVAVKRNTIAVLETGAGKTMIAVMLIKQIGQAVFYSGVKRLILFLAPTVHLV NQQYEVIKSQTNFRVGEYYGAKGIDEWSLKSWEKEIDEHDVLVMTPQILLDALRKAFLNL KMVSLLILDECHRSTGNHPYKKIMKDFYHKMENKPKVFGMTASPVVRKGVLSAMDCEDQL AELESVLNSQIYTIEDRAEVHVYVPSAKESCRFYDKAWCSYAELKDKIEASWSKFDATML ALQGSTQSCYKDMDDKLKATRKQLSKDHAKILNCLESQVREIEKYITGAGGWWDYPQGYI TRAIKVCLENAGNPTGECKLYQEISLQCRYFLEDVLHIIGESLLHGDNFSLDHGFDCSAA LGFGYISPKLHELLQLFLSFGEAREVLCLIFVERIITAKVVERFMKKVEVLAHFTVSYLT GTNASADALAPKMQMETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYV QSRGRARQNNSNFITMLERGNTKQRDQLFEIIRSEWSMTDTAINRDPNVWNLKACASEAA KAYVVDVTGASVTADSSVSLIHRYCQHLPGDRYYTPKPTFQFEVFEQSCRCAMKLPPNAA FQTLVGPTCRSQQLAKQLVCLEACKKLHQMGALDDHLLPSVEEPSEIAVVKSKSTSAGAG TTKRKELHGTTCIHALSGSWGEKLDGATFHAYKFDFSCSIVSEIYSGFILLIESKLDDDV GNIELDLYLVAKIVKSSISSCGVVHLDAAQMTKAKLFQEFFFNGLFGKLFTGSKSSREFL LQKETSLWSPSNMYLLLPLEPWSISSNDRWKIDWKGIEACSSVVEYLKNSFLTARSCSGG GNTLPDNVQSSTVECNGTNLIHFANALVNVENINNMVVLAIHTGRIYSIVKVVNDSSAES AFEGNADNVTEFSTYTEYFNKRYGIVLMHPGQPLLRLKQSHNPHNHLVNFNDEGNSKDGM VGRKQQQHVHMPPELLIKIDVLISVVKSIYLMPSLMHRLECLMLASQLRQVIDCHAPDFY IPSSLILEAITTLRCCESFSMERLELLGDSVLKYAVSCHLFLKYPNKHEGQLSSWRSGTV CNSTLHKLGTDCKVQGYILDSPFNPRRWTAPGQNSVRTPVPCKCGVDTLEVPLDRKFQTE SAIVKVGKPCDSGHRWMVSKTISDCVESVIGAYYVSGGLIAAIHVMKWFGINAELDPSLI SEAITSASLRSYIPKEDEIKSLESKLGYAFGVKFVLQEAMTHASMQEQGVTYCYQRLEFL GDSVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTHLLHCSTLLQS QIREYVNSFHESDQGPKAPKALGDLIESIAGALLIDTKFNLDGVWRIFKPLLSPIVTPEK LELPPLRELVELCDSIGVFVKEKCTKKAEMVHAQLWVQLDNELLSGEGYEKNRKAAKGKA ASCLLKKLQKRGIVYSRGGSKRRKQDTDPVVDSSSPGFLENEDFSGKTKPKKQKIENQVP GDSNADCSPAISPSHGPPVIESINKKKGGPRTSLYDLCKKVQWTMPTFDTTETKSRTAIE FGEGPDKRKGFNSYVSKIIMNIPSYGVVECAGEASADKKTSYDSAALAMLNELEKRGQLI IDGSK NT seq 5058 nt NT seq  +upstreamnt  +downstreamnt atggatactgcaatgccagaccgtgattcgctcaagagaagctttggtgacatgatggtc aacaacaacagctcttcgagctgtcttgctatagatacttccaattgtattactgatcaa aatgacaccaccccacaaggactagcttctgttcttagtaatcataaggagttttatcca agagggtatcagtcaaaggtttttgaggtggctgttaagaggaatacaattgctgtgctg gaaacaggagctggaaagacaatgattgctgttatgttaattaaacagattggtcaagct gtcttttacagtggtgttaagagattgattcttttcttagccccaacagttcatcttgtt aatcagcaatatgaagtcattaaatctcaaacaaatttcagagtgggagagtactatgga gctaagggaatagatgagtggtctctgaagtcctgggagaaggaaattgatgagcacgat gtgttggttatgacaccccagatcctcttggatgccttaagaaaggcttttttgaatcta aaaatggtatccttgttaatacttgacgagtgtcatcgttccaccggtaaccatccttat aagaaaatcatgaaggatttctatcacaaaatggagaataagccaaaggtttttggaatg acagcatctcctgtagttagaaaaggtgtcttgtccgccatggactgtgaggatcaacta gcagaacttgagagtgtattgaattctcagatttatactattgaagacagggcagaggtg catgtctatgttccctctgcaaaagaatcatgtagattttatgacaaagcatggtgttcc tatgcagagctgaaagataagattgaagcttcatggtccaagtttgatgctacaatgtta gctttgcaaggctcaacacaaagttgttacaaagatatggatgataagcttaaagcaacg agaaagcagttgtccaaggaccacgcaaagattttgaattgcctagaatcacaagttaga gaaattgaaaaatatataacaggggcagggggatggtgggattatccccaagggtatatc actagggccatcaaggtttgtctagagaatgctggtaaccccactggtgaatgcaaatta tatcaagaaatttctttgcagtgtagatatttccttgaggatgtgttacatataattggt gaatctttgctgcatggtgataatttctctttggatcatgggtttgactgttcagcagca ttgggttttggctacatatcccccaaactacatgaacttctccaactttttctatcattt ggagaagctagggaagtattgtgcctcatttttgttgaaagaattattacagcaaaagtg gttgaaagatttatgaagaaagttgaggttttagcacatttcactgtttcatatttgact ggaactaatgcatcagctgatgcactggccccaaaaatgcaaatggagaccttggaatca tttcgctctgggaaggtcaatctattatttgccactgatgtggtggaggagggaattcat gtgccaaactgctcctgtgtaatacgttttgatctgcctaagacagtccgcagttatgtc cagtctcggggacgagctcgacaaaataattccaactttatcaccatgcttgaaagggga aacaccaaacaacgggatcagctatttgaaatcattagaagcgagtggtcaatgacagat acagctataaatagagatcctaatgtatggaatctgaaagcatgtgcttcagaagcagca aaggcttatgtggtggatgtgacaggagcatcagtaactgcagactctagtgttagcctc atacatcgatattgtcaacacctccctggcgacaggtactacacaccaaagccaactttt cagtttgaagtttttgaacagtcttgccgctgtgcaatgaagctacctcctaatgcagct tttcaaacattagttggtccaacatgtaggagtcaacaattagcaaagcagcttgtatgc ttggaagcttgtaagaaattgcatcaaatgggtgctttggatgatcatcttctgccatca gttgaagagccttcagaaattgctgttgttaaaagcaagtcaacatctgcaggtgcagga actacaaaaaggaaggaattgcacgggacaacttgcattcatgcattatccggaagttgg ggagagaaacttgatggagccacttttcatgcatacaagtttgacttctcttgctccatt gtcagtgagatctattctggatttattcttctcattgagtcaaagctcgatgatgatgtg ggaaacattgagttggatctttatttggttgcaaagatcgtcaagtcttctatttcttca tgtggagtagttcacttggatgctgcacagatgacgaaagcaaaactgtttcaagaattc tttttcaatggcttgtttggaaagttgtttactggatctaaatcatctagggagttctta cttcagaaagaaacatcactgtggagcccctcaaacatgtatctgcttctaccactagag ccatggagcatttccagtaatgatcggtggaaaatagattggaaaggaattgaagcttgc tcatctgtggtagaatacttgaagaactcctttttgactgctcggtcttgcagtggtgga ggaaatacattacctgataatgttcagtcatccaccgtagaatgcaatggtacaaattta atccattttgctaatgctttagtcaacgtagagaacattaacaatatggtggtattggca atccacacgggaagaatctactccattgttaaagtcgtgaacgattcatctgcggagagt gcttttgagggaaatgctgataatgtgacagagttttcaacatacacagagtacttcaac aaaaggtacggaattgtgctgatgcatccaggacagcctctgttgcggttaaagcaaagc cataacccacacaatcatcttgtaaactttaatgatgaaggtaattcaaaagatggcatg gtaggcagaaaacagcagcaacatgtgcatatgccaccagagcttttgatcaagattgat gttcttatcagtgttgtaaaatcaatttatctgatgccatctttgatgcaccgtcttgag tgcctgatgttggccagtcaacttagacaagtgattgattgtcatgctcctgatttttac atcccaagctcattgattctggaagcgataacaacgcttagatgctgtgaaagtttttcg atggagcgactggagttgctaggggactctgttctaaagtatgctgtcagctgccaccta tttttaaaatatcccaataaacatgaaggccagttatcttcatggcgctcagggactgtt tgtaattcaaccctacataaattgggaacagattgtaaagtacagggttatatactagac agtccatttaatccccgtcgttggactgctcctggacagaactctgtacgtactccagtt ccttgcaaatgtggggttgatactttagaagtaccattggatcgtaagttccaaaccgaa agtgcaattgttaaggttggaaaaccttgtgattcaggtcaccgatggatggtttccaaa accatatcagattgtgttgaatctgtcataggggcatactatgtcagtggtggattgatt gctgcaattcatgtgatgaagtggtttggcattaatgctgaacttgatccttcactaata agcgaagcaattacgagtgcatctctacgatcttatatccctaaagaagatgagattaag agtctagagtcaaagcttgggtatgccttcggtgtcaagtttgtcttgcaggaggccatg actcatgcatctatgcaagaacagggtgttacatactgttaccagaggcttgaatttctt ggtgattctgtattggacttgcttataacatggcatctctatcagagccacacagatgtt gatcctggcgagctgactgacttgcgctcagcttctgttaacaatgataactttgctcaa gttgccgtgaaacaaaacctatatacccatcttcttcattgttctacactccttcaaagt caaataagagaatatgtgaattcttttcatgaatctgatcaaggcccaaaggctcccaag gctcttggagacctgattgaaagcattgcaggggcattattaattgatacaaagttcaat ctcgatggtgtgtggagaatattcaagcccttgttatctccaattgtaacccctgagaaa cttgagctgcctccactgcgtgaacttgttgaattatgtgactctataggagtttttgta aaagagaaatgtaccaagaaagctgagatggttcacgcccagctttgggtacagctggac aacgagctcttgtctggagaggggtatgagaaaaacaggaaagcagctaaaggaaaagca gcttcttgtttgttgaagaagctccagaaaagaggcatcgtatactcacgtggaggttca aagaggaggaaacaggacactgaccctgttgttgattcaagttcccctggcttcttagaa aatgaagatttttctggaaaaacaaagccaaaaaagcagaaaatagaaaaccaagtgcct ggagattcaaatgcagattgttcccctgccatcagtcctagtcatggtcccccagttatt gagtcgattaacaagaagaaaggaggacctcgtactagtctttatgatctctgtaagaaa gttcaatggacaatgcctacatttgacacaacagaaacgaaatccagaactgcaattgaa tttggcgagggccctgataaaaggaagggatttaacagttatgtatcaaaaatcatcatg aacataccgtcgtatggcgtcgttgaatgtgcgggagaggccagtgctgataagaagacc tcatatgactctgcggcacttgcaatgcttaatgagcttgaaaaacggggacagctcatc attgatggatcaaaataa

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