Populus alba (white poplar): 118046129
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Entry
118046129 CDS
T07314
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118046129
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118046129
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118046129
03036 Chromosome and associated proteins [BR:
palz03036
]
118046129
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118046129
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118046129
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118046129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
TetR_C_16
Motif
Other DBs
NCBI-GeneID:
118046129
NCBI-ProteinID:
XP_034910819
LinkDB
All DBs
Position
17:complement(11087012..11092208)
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AA seq
524 aa
AA seq
DB search
MIKQILNRLPKKSSKSADSRDGSGTSTSSSNASTSSRNSDLVSNRYGSSSAASLTDFNSG
PNLGSGYGNKLSQAVNAKLNGNQTGPYEALPSFRDVPNSEKPNLFIRKLNLCCIVFDFNN
PTKNLKEKDIKRQTLAELVDYVSSASGRFSETVMQEIVKMLSVNLFRTLTSPPRENKVLE
AFDFEEDEPLMDPAWPHLQVVYEFLLRFVASTETDAKLAKRYVDHSFVLRLLDLFDSEDP
REREYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFA
LPLKEEHKLFLVRALIPLHKPKCLPMYHQQLSYCITQFVEKDCKLADTVIRGMLKYWPIT
NSSKEVMFLNELEEVLEATQPADFQRCMVPLFCHIRCCLCSLHFQVAETALFLWNNDHIE
NLIKQNHRVILPIIFPALERNARQHWNQAVQSLTLNVRKIFSDIDPELFEECLLKFQKEE
SRENEIKSKREATWKRLEEIAAMKATSNEPVLISPKITRRAPSG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacagatactcaataggctcccaaagaaatcgtctaagtcagccgatagtcgt
gatggaagcggaacatctacctcctcatcaaatgcttctacaagctcaagaaacagtgat
ctagtcagtaaccgatatggaagctcgagtgctgcgtctctgacagattttaattcaggt
ccaaatttaggatcaggttatggcaataagctttcacaagctgtgaatgcaaagctgaat
gggaaccaaaccggtccttatgaggccttgcctagtttcagagatgttcccaattctgag
aagccgaacttgtttatcagaaagctaaacttatgttgcattgtgtttgacttcaataac
cctacaaagaaccttaaagaaaaagatatcaagcgacaaactttggcagagcttgtggat
tatgtttcttcagccagtgggaggttctcagaaactgtaatgcaagagattgttaagatg
ttgtctgtaaatttgtttagaacactcacttctcctcctcgtgagaacaaagtcttagaa
gcttttgatttcgaggaagacgaacctttgatggaccctgcatggcctcatttacaagtt
gtttatgaatttcttttgaggtttgtggcgtcaactgaaactgatgcaaagttagcgaag
aggtacgttgatcactcatttgttctcaggttgttagatctttttgattcagaggatccc
agagagagggagtatctgaaaacagttttgcatcgtatatatgggaaattcatggtgcat
cggccattcatcaggaaagcaattaataacatcttctatcgctttatttttgaaactgag
aagcataatgggattgcagagctattagagattctgggaagtataatcaatgggtttgct
ctgcctctgaaagaagagcacaagcttttccttgttcgagctctcattccacttcacaaa
ccaaaatgcttgccaatgtatcaccagcaattatcatactgcattactcaatttgtggag
aaagactgcaagcttgctgatactgttatacgggggatgctgaagtattggccaatcaca
aatagttcgaaagaggttatgtttttaaatgagttggaggaagttttagaagcaacacaa
ccagcagatttccagcgctgtatggtgcccttgttctgccatattcgctgttgcttgtgt
agtttgcattttcaggtggcagagacggctctgttcttgtggaacaatgatcacattgag
aacctaatcaaacagaatcacagagtcatactgccaatcatcttcccggcattggagaga
aatgcaagacagcactggaatcaagcagtacaaagcttgacactgaatgttcgcaagatc
ttttctgatatcgacccagagctctttgaggagtgtttactcaagtttcagaaagaggaa
tcacgagagaatgagattaagtcgaaacgtgaagctacatggaaacgcttggaggagatt
gctgcaatgaaagctacaagtaatgagccagtgctcatctcccccaaaatcacgaggcgg
gcaccatctgggtag
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