Populus alba (white poplar): 118046168
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Entry
118046168 CDS
T07314
Name
(RefSeq) phytochrome B
KO
K12121
phytochrome B
Organism
palz
Populus alba (white poplar)
Pathway
palz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
118046168
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Ortholog
Paralog
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
118046168
NCBI-ProteinID:
XP_034910854
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Position
10:15044723..15051728
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AA seq
1134 aa
AA seq
DB search
MASQSQRQSNQPAHNQAQSSGTSNMRQHHHPTESVSKAIAQYTVDAQLHAVFEQSGGTGK
SFDYSKSVRTPNQSVPEEQITAYLSKIQRGGHIQPFGCMIAADEQSFRVIAYSENAKDML
GLTPQSVHSLEKQEILFVGADVRILFRPSSAVLLEKAFGAREITLLNPIWIHSKNSGKPF
YAILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVV
DSVRELTGYDRVMVYKFHEDEHGEVVAENKRVDLEPYIGLHYPSTDIPQASRFLFKQNRV
RMIVDCHAIPVSVIQDEGLMQPLCLVGSTLRAPHGCHAQYMENMGSIASLAMAVIIYGND
EEAIGGRNSMRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLLEKHV
LRTQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGQYYPLGVTPTEAQIKDIVE
WLLTLHGDPTGLSTDSLADAGYPGAAFLGDAVCGMAVAYIAERDFLFWFRSHTAKEVKWG
GAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAEAT
NSKAVVHTQLKDMELQGMDELSSVAREMVRLIETATAPIFAVDVDGRINGWNAKVAELTG
LSVEEAMGKSLVHDLVYKEYEEIVDKLIHRAVKGEEDKNVEIKLRTFCSEHQKKAVFVVV
NACSSKDYMDNIVGVCFVGQDVTGQKVVMDKYVLIQGDYKAIVHSPNPSIPPIFASDENT
CCLEWNTAMEKLTGWSRGEVVGKMLVGEVFGSCCRLKGPDALTKFMIALHNAIGGIDTDK
LPFSFFDRNEKNVQTLLTANKRVNMKGDIIGAFCFLQIASPELQQSLKVQKQQEKKSFAR
MKELAYICQEIKNPLSGIHFTNSLLENTDLTEDQQQFLETSAACEKQILKIIRDIDLESI
ENGSLELEKAEFLLGSVINAVVSQAMLLLRERNLQLLRDIPEEIKTLAVYGDQARIQQVL
ADFLLNMVRYAPSSAGWVEIHVCPTLKQISDGHTLVHTEFKIVCPGEGLPPELVQDMFHS
SRWVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLVVLEVPMPRKVGKGAAD
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaatcacaaaggcaaagcaatcagccggcccataatcaagctcagtcttcg
ggtaccagtaacatgaggcaacaccatcaccccacagaatcagtaagcaaagcaattgca
caatacacagtcgatgcacaactccatgcagtttttgaacaatctggtggcactggtaag
tcatttgattactcaaagtctgttagaactcctaaccagtcagtacctgaagaacaaatc
acagcgtatttgtcaaaaattcaaagaggtggtcatattcagccatttgggtgcatgatt
gctgcagatgaacagtcttttagggtcattgcgtatagcgaaaacgccaaagatatgctt
ggtttaactccacaatcagtccattctttagagaaacaagaaattctctttgttggggct
gatgtaaggattctttttaggccttccagcgccgttttgcttgaaaaagcatttggtgca
agggaaataacattgttgaatccaatttggattcattccaagaattccgggaagcccttt
tacgcaattttgcataggattgatgttggtattgttattgatttagagcctgctaggacc
gaagaccctgctttatctatagcaggggctgttcagtctcagaagttagcagttcgtgcg
atttcacaattacaatcacttcctggtggggatattaagttattatgtgatactgttgtg
gacagtgtgagagagcttaccgggtatgatagagttatggtttataagtttcatgaggac
gagcatggtgaggttgtcgctgagaataaaagggttgatttggaaccttatatcggtttg
cattatccttccacggatataccacaagcttcgaggtttttgttcaagcagaatagggtt
aggatgattgtggactgtcatgccataccggtcagtgttattcaggatgaggggcttatg
cagcctttatgcttggttggttcgactcttcgtgctcctcacggttgtcatgctcagtat
atggagaatatggggtcgattgcttcattggccatggctgttattatttatggaaatgat
gaagaagctatcggtgggaggaactcgatgaggctttggggtttggttgtttgccatcac
acttctgctaggtgtattccatttccgcttcgttatgcgtgtgagttcttaatgcaggct
ttcgggcttcaattgaacatggaattgcagttggcatcgcagttgttggagaaacatgtc
ttgaggactcagactctcttatgtgacatgcttctccgcgactctcctactggcattgtt
actcaaagtccaagtatcatggaccttgtgaagtgtgatggggcagctctttattaccag
gggcagtattaccctttaggcgtgaccccaactgaagcccaaataaaagatattgtggag
tggttgctgacccttcatggagacccaactggattaagcactgacagtttggctgatgct
gggtatcctggggcagcctttctcggcgatgcagtttgtgggatggctgttgcttatatt
gctgagagagattttctcttttggtttcggtctcacactgcaaaggaggtcaaatggggt
ggtgcgaaacatcacccagaggacaaggatgatgggcagaggatgcatccgcgttcatca
ttcaaggcattcttagaggtggtgaagagccggagtttaccgtgggagaatgcagaaatg
gatgccattcattctttgcagcttattttgcgagactcatttagggatgctgaagcaacc
aattctaaggctgttgtacatacccagctcaaggatatggaattgcaaggtatggatgag
ctcagttcggttgcaagagaaatggttagactaatagagactgcaactgctccgatattt
gctgtagatgttgatggccgcataaacgggtggaatgcaaaggttgctgagttgactgga
ctctcagttgaggaagccatggggaagtctttggttcacgatcttgtttacaaggaatat
gaagaaattgttgacaagcttattcatcgtgcagtcaaaggcgaagaagataagaacgtg
gagataaaattgaggaccttttgctctgaacaccaaaagaaggctgtttttgtggtggta
aatgcttgttcaagcaaggattacatggataatatagttggggtttgctttgttggtcag
gatgttacaggtcaaaaagtggtaatggacaaatacgtccttatacaaggtgattataag
gctattgtacacagtcccaatccttcgatccctccgatttttgcttcagatgagaacaca
tgttgcttggagtggaacactgccatggaaaaactcacaggatggtccaggggcgaagtt
gttgggaagatgttggttggggaggtttttggcagttgctgtaggctcaagggtccagat
gcactgacaaaattcatgattgccttgcacaatgcaattggagggatagatacagacaag
ttacccttttcattctttgaccggaatgaaaaaaatgtgcaaactctcttgacagctaac
aagagggttaatatgaagggagatattattggagccttctgcttcttgcagattgcaagt
cctgagttgcagcaaagtttgaaagttcagaaacagcaggaaaaaaaaagctttgcaagg
atgaaagagttggcttacatttgccaggaaataaaaaatcctttaagtggtatacacttt
accaactcgcttttggagaacacagacttgactgaagatcaacagcagtttctcgagact
agtgctgcatgtgaaaaacagatattgaagatcatacgagacattgatcttgaaagcatt
gaaaatggttcactggagcttgagaaggctgaatttttacttgggagtgtcataaatgct
gttgttagccaagcaatgctattgctgagggaaagaaatctacaattgcttcgtgatatt
ccagaagaaataaaaacgctggcagtttatggtgatcaggcaagaattcaacaagtattg
gctgatttcttgttgaatatggtgcgttatgctccatcttcagcaggttgggtggagatt
catgtttgtccaacactgaagcaaatctctgatggacacactctcgtgcatacagagttc
aagattgtttgccctggtgaaggtcttccgcctgaattagttcaagacatgttccatagt
agtagatgggttactcaagagggcctagggctcagcatgtgcaggaagatcttaaagcta
atgaatggtgaagtccaatatatcagagagtcagaaagatgctatttcttagttgtcctc
gaagtacccatgcctcgaaaagttggaaagggtgctgcagactag
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