KEGG   Populus alba (white poplar): 118046299
Entry
118046299         CDS       T07314                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
palz  Populus alba (white poplar)
Pathway
palz03022  Basal transcription factors
palz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118046299
  09124 Replication and repair
   03420 Nucleotide excision repair
    118046299
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:palz01001]
    118046299
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palz03021]
    118046299
   03019 Messenger RNA biogenesis [BR:palz03019]
    118046299
   03400 DNA repair and recombination proteins [BR:palz03400]
    118046299
Enzymes [BR:palz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     118046299
    2.7.11.23  [RNA-polymerase]-subunit kinase
     118046299
Protein kinases [BR:palz01001]
 Serine/threonine kinases: CMGC group
  CDK family
   118046299
Transcription machinery [BR:palz03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     118046299
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     118046299
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     118046299
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 118046299
NCBI-ProteinID: XP_034911027
LinkDB
Position
12:5111163..5116817
AA seq 416 aa
MSENDVEKKVADRYLKREILGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDPNIFLSPGDIKSYFQMT
LKGLLVCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPGRKFTHQVFARWYRAP
ELLFGAKQYGAGVDVWAAGCIFAELLNRRPFLQGDSDIDQLGKIFQKLGTPTPSQWPDLE
WLPDFVEYSSQTAQPWRKLCPTASDDALDLLSKLFTYDPKTRITVQQALEHRYFTSVPLP
TDPAKLPRPAPKRESHNPRTSDLHEGPTVLSPKKKARRVMPDREVFDGNAYHVDKIDQHG
GEIRWAAGDNTSRNEQVPMSVDFSIFGAKPMSRPTINSADRSHLKRKLDLEFQHPE
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgtcagagaatgatgtcgagaagaaagtagcggatagatatctaaagcgagagattctt
ggtgaaggtacttatggtgttgtctacaaagctattgatactaagacaggacagacggtt
gcaataaaaaaaattcggctcggaaaacaaaaggaaggagtaaattttacagcacttaga
gagattaaactgcttaaagagcttaaagacccgaatataattgagttgatcgatgctttc
cctcataaagggaacttgcatcttgtgtttgagttcatggagactgatctcgaagcggtt
attcgtgatccaaatatatttctttctcccggggacataaaatcatactttcagatgact
ttgaaaggactactggtttgccataaaaaatgggttttgcatagggatatgaagccaaat
aacttgttgataggatctaatggacagctcaaacttgcagattttggtttagcgcgtatt
tttggaagcccgggtcgcaaattcacgcaccaagtctttgctcgatggtatagagcacct
gaacttttgtttggtgccaagcagtatggtgctggtgttgatgtatgggctgctggttgt
atatttgctgagctacttaaccgcagaccattcctgcagggggatagcgacattgatcaa
cttggaaagatctttcagaagctggggactccaactccttcgcagtggcctgatttggaa
tggcttcctgattttgtagaatattcatctcagactgcacaaccttggcgaaaattgtgt
cctacagctagtgatgatgctttagatctgttatctaagctgtttacatatgacccaaaa
actagaattacagtgcagcaagcattggagcacaggtactttacatctgtacctctgccc
acagatccggctaagcttcccagaccagcccctaagagagaatctcacaacccaaggact
tcagatttacatgagggtcctactgtcttgtcaccaaaaaagaaggcaagaagagtgatg
ccagatcgtgaagtgtttgatggaaatgcataccatgttgataagattgatcaacacggt
ggtgagatcagatgggccgctggggataacacaagcaggaatgaacaggtgccgatgtcg
gttgatttttcgatcttcggagcaaaaccaatgagcagacctacaattaacagtgctgac
agatctcatctaaagaggaaactggatcttgaattccagcatcccgaataa

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