Populus alba (white poplar): 118046677
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Entry
118046677 CDS
T07314
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118046677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118046677
Spliceosome [BR:
palz03041
]
Common components
Common spliceosomal components
SR proteins
118046677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
118046677
NCBI-ProteinID:
XP_034911542
LinkDB
All DBs
Position
12:1037822..1042244
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AA seq
291 aa
AA seq
DB search
MSGRFSRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGSRLRVELAHGGRGPSSNDRRGGYGGGGGGGGGGGGGGGGGRLGISRHS
EFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDGDGTLGLVDYTNHEDMKYAIRKLD
DTEFKNPWARAYIRVKQYEGSPSRSRSRGRSRSRSRSRSRSRSRSRSRSRSRSRSPRRNR
SKSLERSVSRSRSRSRSRSKTRSASPLKSSRPKSRSRSRSESPTKARSGSA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgtttttctcgtacaatctacgttggcaacttacctgcagatataagagaa
tcaaaagttgaagatctgttttacaagtatggccgtatcctggatgttgaattgaagatt
ccacctcggcccccttgttattgttttgtcgagtttgaaaatgctcgggatgctgaagat
gcaataaggggccgtgatggctataactttgacggttctcgtttaagggttgagcttgcc
catggtggtagaggaccatcgtcaaatgatcgtcgtggtgggtatggtggtggtggtggt
ggaggaggaggaggaggaggcggtgggggtgggggtcgacttggcatctcgcgccattct
gaatttcgagttattgttcgtggtcttccttcttctgcttcctggcaagatttgaaggat
catatgcggaaagcaggagatgtgtgttttgctgaagttactcgtgatggtgatggaact
ttaggacttgttgattatacaaatcatgaagacatgaaatatgccattcggaaacttgat
gatactgagtttaaaaatccctgggccagagcttatattcgggtgaagcaatatgagggc
tctccatcaaggagccggagccgtggtcggagcaggagcaggagcagaagccggagcagg
agcaggagcagaagccggagcaggagcaggagcaggagccgaagtccaaggaggaaccgg
agcaaatcattggaacgatctgtttcaaggtcaaggtcgaggtcaaggtcaaggtcaaaa
actagatctgcttcacctctcaagtcatccagaccaaaatcaaggtccaggtcgaggtct
gaatctcccaccaaggcacggtcaggcagtgcctga
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