Populus alba (white poplar): 118046735
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Entry
118046735 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118046735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118046735
03036 Chromosome and associated proteins [BR:
palz03036
]
118046735
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118046735
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118046735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
PilN
Motif
Other DBs
NCBI-GeneID:
118046735
NCBI-ProteinID:
XP_034911625
LinkDB
All DBs
Position
19:8132134..8138885
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AA seq
1053 aa
AA seq
DB search
MFGSSNPFGQSSNSPFGTTQPVFGQASNVSNSPFALKPFGSPTTPFGAQTGSSIFGGTST
GMFGAPQTSSFSATNAFGSSTPAFGASTTPAFGGSSSSAFGAGSSVFGQKPFGGFGSTTQ
TSPFGNTNQQPQPGGFGSTTQTSPFGNTNQQPQPGGFGSTTQTSPFGNTNQQPQPGFGST
TQTSPFGNTNQQPQPGFGNNSLFGSTPFGAPSQSAFGAASAPAFGTSTAPAFGSTSTTPA
FGSTSTTPAFGAPSTTPAFGSTATPGFGSTGASFASQPLFGAGGAFGTSTSVFGSSATTP
AFGSLTGSGFGTPTTSAFGGTSSPSFTFSSSPGFGQSTSTFGSSPFGSTTSTFPAQPSPF
GAQPTTSAFGNTGFAQPGFGGHRPGTRAAPYAETAEAEGGAQAGKLVSISAMPAYKDKSH
EELRWEDYQLGDKGGPLPPGQSPGGAGYSMSTPQANPFAPSTGLGQTSTNMFSSTATNLF
APKTQTSPSFTTASPFGPSTSSNLFQPSTPAFSVGSSPSLFGSTSMPNFSTTPSLFSSTT
GQGNASPFGSNMFNNTQSSLSFPSTTPSMGQTTAFPQSNPFGPSTTSSLFSSPATGGLFS
STQSQITPNLGGFNQMTPSQPAQNAGIFALNFSQTQAAGNSGFAGLSSNFGQPFTTQNAV
AVQPVPITNPFGTLPAMPQVSFGRAGTTPSVQYGISTMPVVEKPSPIRISSLLTSRHLSQ
RRIRLPMRKYYPKHDGPKVPFFSDEEETPSTPKADALFIPRENPRALVIRPMDQWPSRES
AEKASPLNASAPVYENGKFSVSEDACTSNGSTAGDKNKNSAENGVIKEQVKVNQKPNGVH
EDHATQREESYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYFTEPRIQELAAKERAK
PGFCQHVKDFVVGRHGYGSIKFLVETDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGL
NKPAEVTLLNIKCVDKKTGRQFTEGPKIERYKEMLKRKAEDQGAEFVSYDPVKGEWKFKV
NHFSKYMLEDEEEEDWDVQATCNKVDDCLVLKE
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctagcaatccttttgggcagtcttctaatagtccgtttgggacgacacag
ccggttttcggtcaggctagtaatgtaagtaacagtccttttgctctgaaaccctttggt
agtccaacaactccttttggtgcacaaacagggagttccatatttgggggcacttctact
ggtatgtttggtgcaccccaaacttcttcattctcagcgacaaatgcttttggtagctca
acgcctgcttttggagcatctactacccctgcatttggtggttcgtcatcatcagcattt
ggtgcaggttcttctgtttttggtcagaagccctttggaggctttgggtctaccactcaa
acaagtccatttggaaacacaaatcaacagccacagccaggaggctttgggtctaccact
caaacaagtccatttggaaacacaaatcaacagccacagccaggaggctttgggtctacc
actcaaacaagtccatttggaaacacaaatcaacagccacagccaggctttgggtctacc
actcaaacaagtccgtttggaaacacaaatcagcagccacagccaggctttggaaacaat
agtttatttggttcaacaccttttggtgcgccatctcagtctgcatttggtgctgctagt
gctccagcctttggtacaagcaccgcgccagcctttggttccacaagcaccacgccagcc
tttggttccacaagcaccactccagcctttggggccccaagcaccactccagcctttggc
tcaacagcaactccaggttttggtagcacaggagcttcatttgccagtcagccactgttt
ggagctggtggagcttttggaacttccacttcagtttttggatcttcagctactacacct
gcttttgggagtttgactggttctggctttggcactccaaccacttctgcctttgggggt
acatcttccccatcctttacgttttcatcaagtccgggttttggccaatcaacttctact
tttgggagcagcccatttggaagtactacatctacttttcctgcccaaccttctcccttt
ggagctcagcctacaacatcagcatttggaaacactggctttgcccagccagggtttggg
gggcaccgtcctggaactagagcagcaccttatgcagaaactgctgaggcagaaggtggt
gcacaggctggaaaattagtgtcaatatcagccatgcctgcctacaaagataaaagccat
gaagagctaaggtgggaggactatcaattgggagacaaaggtggaccgcttcctcctggt
caatctcctggtggggctggatatagcatgtctaccccacaagcgaatccttttgctcct
tcaactggacttggtcaaacatctacaaatatgttttcttcaacagccacaaacctgttt
gctccaaaaactcaaacatcaccttcattcaccaccgcctccccttttggcccttcaacg
tcatccaacctctttcagccatcaacacctgcattctcagttggatcatctccatctctt
tttggatcaacaagcatgcctaattttagtacaacaccatccttgtttagttctactaca
ggccaaggaaatgcttcaccatttggttccaatatgtttaataacactcaatcatctctc
tcattcccatctaccacaccttcaatggggcagacaactgcatttccacagtccaatcca
tttggaccaagtaccaccagttccttgttcagtagccctgctactggcggccttttctca
agcactcaatctcagataactccaaaccttggggggtttaatcaaatgactccatctcaa
ccagctcagaatgcaggtatttttgccttgaacttcagtcagacacaagcagctggtaac
agtggctttgctggtttatcaagtaattttggacaaccgtttaccacacaaaatgctgtt
gctgtacaaccagtgcctattacaaatccatttggaacacttcctgcaatgcctcaagtg
tcctttggtcgagctggaactacaccttcagttcaatatggaatctctactatgcctgtt
gttgagaaaccctctcccattagaatatcatctttattgacttctaggcacttgtcacag
aggaggatcaggttgcccatgaggaaatattatcctaaacatgatggaccaaaggttcca
tttttcagtgatgaagaagaaacacccagtacaccaaaggcagatgctcttttcattccg
agggaaaacccaagagctctagtcattcgtcctatggaccagtggccttcaagggaaagt
gcagagaaagcgtctccattgaatgcatcagcacctgtatatgagaacggaaaattttca
gtatcagaagatgcttgtacctcaaatggttccactgctggtgataaaaataaaaattca
gctgagaatggtgtgatcaaggagcaagttaaagtcaaccagaaacctaatggagtccac
gaggatcatgcgactcagagagaggagtcctacatgacacttagcggtcacagagctggt
gaggctgcaattgtgtatgagcatggagctgatattgaggcgctaatgccaaaactccga
cgttctgactatttcaccgagcctcgtatccaggaactggcagccaaggagagggctaaa
ccgggattctgccaacatgttaaggattttgtcgttggaaggcatggctatggcagcatc
aagttcctggttgaaacagatgttcgaaggcttgatcttgagtcccttgttcagtttaat
aaccgtgaagttatcgtgtacatggatgatagcaagaaaccgcctgttggacagggtcta
aacaagcctgccgaggtaacacttctcaacataaaatgcgtcgacaaaaagactggacgc
cagttcacagaaggaccaaaaatcgagagatacaaggagatgctcaaaagaaaagctgag
gaccaaggcgccgaatttgtttcttatgaccctgttaaaggagagtggaagttcaaggtc
aaccatttcagcaagtacatgctggaggatgaagaagaggaggattgggatgtgcaagct
acctgtaataaagttgatgactgcttggttctgaaggagtga
DBGET
integrated database retrieval system
