Populus alba (white poplar): 118046832
Help
Entry
118046832 CDS
T07314
Name
(RefSeq) LOW QUALITY PROTEIN: cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00520
Amino sugar and nucleotide sugar metabolism
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
118046832
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
palz01003
]
118046832
Enzymes [BR:
palz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
118046832
Glycosyltransferases [BR:
palz01003
]
Polysaccharide
Structural polysaccharide
118046832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
Xin
Motif
Other DBs
NCBI-GeneID:
118046832
NCBI-ProteinID:
XP_034911774
LinkDB
All DBs
Position
2:complement(12488215..12492450)
Genome browser
AA seq
1165 aa
AA seq
DB search
MVKRAGSPCSSPVTITVSSGCKGGGSRSMGLTSPVPRTSISNNPNSPLSNNRNRTSSGGR
YCSMSRDDATEENNSEFVSYTVHIPPTPDHQTFSASQSSLAEDIKNASKPDRSFISGTIF
TGGFNSVTRGHVIDCSVENNESLKSGLVCGMKGCDEKAIKGKCECGFKICRDCYLDCVGS
NGGGRCSGCKEPYKDVDDEGDDDDDDDYAYDEAKSEADDQALPLPKLDKRLSLAKSFKAQ
NHPPDFDHTRWLFETKGTYGYGNAVWPKDGYGVGSGGNGFEQPPEFGERSRRPLTRKVKV
SAAILSPYRLLIVIRLVALGLFLTWRIRHPNREAMWLWGMSITCEIWFALSWILDQLPKL
CPVRRVTDLSVLKERFESPNLRNPKGRSDLPGTDVFVSTADPEKEPPLVTANTILSILAV
DYPVEKVACYLSDDGGSLLTFEALAETASFARIWVPFCRKHNLEPRNPEAYFGQKRDFLK
NKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRARKKHMEMGESPSE
TVKVPEATWMSDGSHWPGTWASGEADHSRGDHAGIIQAMLAPPNAEPVFGVEADGENLID
TTEIDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYISNSL
ALREGMCFMLDRGGDRICYVQFPQRFDGIDPSDRYANHNTIFFDVSMRALDGLQGPMYVG
TGCIFRRTALYGFSPPRTTEHHGWFGRRKIKLFLRKPKAAKKQEDEIALPINGDRGDIDD
VDIESLLLLPIRFGNSTSLAASIPVAEYQGRLLQDLQGKGSHGRPAGSLAVPREPLDAAT
VAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTA
PINLTDRLHQVLRWATGSVEIFFSRNNALFATRRMKFLQRVAYFNCGMYPFTSMFLIVYC
VLPAISLFSGQFIVQSLSVTFLVLLLVITITLCLLAILEIKWSGITLNDWWRNEQFWLIG
GTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGDDGLADLYVVKWSFLMVPPITIMI
LNLIAIAVGVARTVYSPFPQWSRLLGGVFFSFWVLSHLYPFAKGLMGRRGRVPTIVYVWS
GLLSIIISLLWVYISPPNVVSLLAT
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaagggctggctctccatgttcatctccagtgaccataactgtctcatcagga
tgcaaaggaggaggaagtagaagcatgggcttaacaagtccagtaccaagaacttccatt
tcaaacaacccaaactcccctcttagcaacaatagaaatagaacatctagtggaggcaga
tactgttcaatgtccagagacgatgccacggaggaaaacaattcagagttcgtctcgtac
actgtccatataccgcccactccagatcaccagaccttttcagcctcacagtcaagccta
gctgaagacataaaaaatgctagcaaacctgataggagtttcatttctggtactattttc
actggtgggttcaattctgttacacgtgggcatgttattgattgctcggtagaaaacaac
gagtccctgaaatctgggcttgtttgtggcatgaaaggttgtgacgaaaaagcaattaag
ggaaaatgtgagtgtgggttcaagatttgtagagattgttatttagactgtgtggggtct
aatggaggaggtcgttgttctggttgcaaggaaccatacaaggatgttgatgatgaggga
gacgatgacgatgacgatgattatgcttatgatgaagcgaaaagtgaagcagacgatcag
gcactgccgttgcctaaattggataagaggctttcacttgcgaagtcgtttaaggcgcag
aatcatcctcctgattttgatcatactaggtggttgtttgagacgaaggggacttatggt
tatggaaatgctgtgtggcctaaagatgggtatggtgttggttcaggtggtaatgggttt
gagcaacctccagagtttggagagagaagcaggaggcctttgaccaggaaggttaaggtt
tccgcagcaatcctcagcccatacaggctactcatcgtgatacgtcttgtggctcttggg
cttttccttacatggagaatccgacaccctaatcgtgaagctatgtggttatgggggatg
tccataacttgtgagatatggtttgcactgtcgtggattcttgatcagctccctaagctc
tgccctgtacgcagagtgactgacctctctgtgctgaaagagcggtttgaatcccccaat
cttcgaaacccgaaaggtcgatcagacctcccaggcactgatgtatttgtttccacggca
gaccctgaaaaggaacctcctttggtcactgcaaacaccatcctttcaatacttgcggtt
gattatccagtggaaaaggtagcttgttacttatcggatgatggtggatccctcttgacg
tttgaagctctggctgagacagccagctttgcaagaatttgggtacctttctgtaggaaa
cacaatttagaacccaggaaccctgaggcctatttcgggcagaagcgtgattttcttaag
aacaaagtgagacttgattttgttagagagaggagaagagtaaagagagaatatgatgaa
tttaaggtgaggatcaattcactgcctgaatcaattaggagaagatcagatgcatataat
gcccatgaagagcttcgagctaggaaaaaacatatggaaatgggggaaagtccatcagaa
actgtgaaggtgcccgaggctacctggatgtcagatggttctcattggccggggacttgg
gcttctggagaagcagaccactcaagaggagaccatgctggaataatccaggctatgcta
gctccaccaaatgcagaacctgtttttggtgtagaagcagatggtgagaacttgattgac
accacagaaattgatattagattgccaatgctggtctatgtgtctcgcgaaaagaggcca
ggctatgatcacaataagaaagctggggcaatgaatgctctagttagaaccagtgcaatc
atgtcaaatggtcccttcattctgaatctggattgtgatcactacatttctaactctctg
gctttgagagaagggatgtgctttatgcttgataggggtggtgataggatctgttacgtt
cagttcccacaaaggttcgatgggattgatccaagtgatcggtatgcaaaccacaataca
atattctttgatgtaagcatgagagctcttgatgggctacagggtccgatgtatgttggg
acaggctgtattttccgcagaacagctctttatgggtttagtcctcctagaaccacagag
caccatgggtggtttggtaggaggaaaatcaaattgttcttgaggaaacccaaggcagca
aagaagcaagaggatgagatagctttgccaatcaatggggatcgcggcgatattgatgat
gtagatattgagtctttgcttcttctacctataaggtttgggaactctacttctctagct
gcatctatcccggttgcagaataccagggaaggctgcttcaagatttgcaaggaaaaggt
agccacggaagaccagccggttcccttgcggtgcctcgtgagcctttagatgctgcaact
gttgcagaggcaatcagtgtcatctcttgtttctacgaggataaaactgagtggggaaag
agagtaggatggatatatggttcggtaacagaagatgtggtgactggttatcgtatgcac
aacagaggatggaggtctgtctattgtgtaaccaaaagggatgcatttcgaggaacagcg
ccaattaatctaacagacaggcttcaccaagtccttcgatgggcaacaggctcagtggaa
atcttcttttcacggaacaatgcactatttgctactcgccggatgaaattcttacaaaga
gttgcatatttcaactgcggaatgtacccattcacatccatgtttctcatagtttattgc
gtcctacctgcaatctctcttttttccggccagttcatagtccaatcactcagtgtgacc
tttctagttctcttgttggtgatcactatcaccctatgcttgcttgcaattctagaaatc
aaatggtcaggaatcacacttaatgattggtggcgaaatgaacagttttggttgattggg
gggacaagtgcccatcctgcagcagttttacaaggactactgaaggttatagcaggagtt
gacatctcattcactttgacatctaaatctgccacgcctgaagatggagatgatggactt
gctgacttatatgtggttaagtggagcttcttaatggtccctcctattacaataatgatt
ctgaacctgattgcaattgcagtaggagttgccagaactgtgtacagcccatttccacag
tggagcaggctccttggaggagtgttcttcagcttctgggttctgtcccatctttacccc
tttgccaaaggcttgatgggaaggaggggaagggtcccaaccattgtctatgtgtggtct
ggactactctccatcatcatttctttgctgtgggtgtacattagtcctcctaatgtagtt
tcattactggctacatga
DBGET
integrated database retrieval system
