Populus alba (white poplar): 118046878
Help
Entry
118046878 CDS
T07314
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118046878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118046878
03016 Transfer RNA biogenesis [BR:
palz03016
]
118046878
03029 Mitochondrial biogenesis [BR:
palz03029
]
118046878
Enzymes [BR:
palz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
118046878
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
118046878
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
118046878
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
118046878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_C
POP1_N
Motif
Other DBs
NCBI-GeneID:
118046878
NCBI-ProteinID:
XP_034911853
LinkDB
All DBs
Position
2:11957147..11963629
Genome browser
AA seq
865 aa
AA seq
DB search
MAGDGSKKSKVSTAPPRKINVQKFAETRASELESLHSIVSNRLNNNYRSQRNKRRRTTAY
ENQAAKKRHRKRRNLGLLGKANDDLSSASENKEPRKVPRRVRRRIELKKNPESGFATSGD
GTRRLRTHVWHAKRFTMTKLWGFHLPLGLHGRGRGSRALLKWYRDGAVVHDASYHTAVQL
EGPEESLISILNMVLVPSLSAQSRDIAKSILTGVIYGTAMLHHAGAPVSQPIAPVNYMWR
PSCLRNRENGNNEHSSGVCNETQISDACSSHRQLWVWIHASAFSEGYDALKFACQKQMNE
SGILINCLSLEGQLAKLEVMGSKASELLQKTLHPFSCNSDNSWQLRNCSVLEVDGDSELK
KSIFQSENISPCSVLSLAVKDPRSLPVKIVDIPKPTPTSVLNNVPEDEAKEHDSLTVNFG
NGEKHPHSWLSEPEKSSSVPDNRSLWDASSRVTPPVEENVLCWERHHLRLDFICLDGCKS
RTPNTSSKVQGSTSCPILLLTNSNGMDSLMRWSVILPLSWVRVFWIPFVSKGAHAIGLRE
KRWIACEVGLPQFPSDFPDCNAHLSFMVNESAALDHKVERLPPSVRPLKVPMPFPWNSVH
LALDKGSAIVQDPQISGQKDNIDDNSLLSSEDGDCAKTAATGHCNSFDGFVGRTSSILID
FLSEIHASHLLLFPHIPNKKTRLSELMKDESILSKGQCSAHQITSNRRLCFIRVLLHAYK
EGFFEEGAVVCAPGPSDLSKWISRSEINDGGLQISQSSVGSYFKEQPSSKWELLIPQDHV
VRESHRWPIGFVTAGFVRGSKKLVAEAFCEAVLLAQLREEQWRGMPVKQRRKEIYVLVRN
LRSSAYRLALATVVLEQEEEDVVFL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgatggaagcaaaaaatctaaagtatcaacagctccacctagaaaaatcaat
gttcaaaaatttgcagaaacccgggcatctgaactggagagtcttcactcaatcgtatca
aaccggctaaacaacaattaccggtctcaaagaaacaagagaagaagaaccactgcttat
gaaaatcaagctgcgaaaaagagacatcgaaagagacgtaatttaggcctcctcggtaaa
gccaatgatgacctgtcttcggcttcagaaaataaagagccaaggaaagtccctcgccga
gttcgcaggagaattgagctgaaaaagaatccagaatctggttttgctacttccggcgat
ggcaccaggagattgagaactcacgtctggcatgccaaacgttttacaatgactaagctt
tggggatttcaccttcctcttggtttgcatggcagagggaggggatccagggctctattg
aagtggtacagagacggagcggttgtgcatgatgcaagctaccatactgctgtccagttg
gagggtccagaggagtcattaatttcaattctaaatatggtactagtgccttctctatca
gctcaatctcgcgatattgccaagtctattcttactggtgttatctatggcactgctatg
ctgcatcatgctggagcacctgtttctcagccgatagctcctgtgaactatatgtggcga
ccttcttgtcttcgcaatagagaaaatggcaataacgaacatagttctggtgtatgtaat
gaaactcaaatttctgatgcttgttcttcccatcgtcaactttgggtgtggatacatgct
tcagcttttagcgagggatatgatgctctgaaatttgcttgtcagaaacagatgaatgag
agtggcattttgatcaattgtttgtcactcgaaggccagcttgcaaagttagaagtaatg
ggatcaaaggcatctgaacttttacaaaagacattgcatcctttttcttgtaattcagat
aattcttggcaattgaggaactgctctgttttagaagttgatggtgactctgagttgaag
aaatctatatttcaaagcgagaacatttctccttgttcagttttatctcttgctgtcaag
gatcctcgttctctgcccgtaaaaattgttgacattcccaagccaacccctactagtgta
ctcaataatgttccagaagatgaagcaaaagagcatgattccttaactgtaaattttgga
aatggtgaaaaacatcctcactcatggctttcagaacctgaaaagagtagcagtgtccct
gacaataggagtttgtgggatgcaagcagcagagtaactcccccagtggaagaaaatgtt
ctttgctgggaaaggcatcatttgcgtttggattttatctgccttgatggttgtaaatca
aggacaccaaatacttcatctaaggtgcagggttcaacatcttgccctattctgcttctt
acaaacagtaatggaatggactcactgatgcgatggtctgttatacttcccttaagctgg
gttagggtcttctggattcctttcgtctccaaaggagcacatgcaataggtctgagagaa
aagcgatggattgcttgtgaagttgggctgccacaatttccttctgattttcctgattgt
aatgcacacttatcttttatggtgaacgaaagtgctgcccttgaccacaaagtggaacga
ctacctccttctgtaagacctctgaaagttcccatgcctttcccatggaatagtgttcat
cttgctctcgataaaggatctgctatcgttcaagatcctcaaatttctggtcaaaaagat
aacattgatgacaattcattattgagctcagaagatggggattgtgcaaaaacagcagcc
actggtcattgtaattcatttgatggatttgtaggacggacatccagtatactgattgat
ttcttgagtgaaatccatgccagtcatttgcttttgtttcctcacattccaaataagaag
acaaggctttcagagcttatgaaggatgaaagcatcctcagtaaaggtcaatgcagtgcc
caccaaatcacttctaaccgtagattatgtttcattagagttcttctacatgcatacaag
gaaggtttttttgaagaaggggcggttgtttgcgctcctggtccaagtgatttatctaag
tggatttctagatcagaaattaatgacggtggacttcaaatttcccagtcatctgtgggt
tcatatttcaaagagcaaccatctagtaagtgggaactcttgataccgcaggaccatgtg
gtaagagaatctcatagatggcctatcggttttgtcactgctggatttgttcgagggagc
aagaagctagtggctgaggctttttgtgaggcagttttactagctcagcttagggaggag
cagtggagggggatgccggtgaagcaaaggaggaaggaaatatatgtcctagttaggaac
ctgagatcttctgcatatagactcgcccttgccactgtagtcctggaacaagaagaagaa
gatgtggttttcttgtga
DBGET
integrated database retrieval system
