Populus alba (white poplar): 118046934
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Entry
118046934 CDS
T07314
Name
(RefSeq) protein argonaute 5 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118046934
03036 Chromosome and associated proteins [BR:
palz03036
]
118046934
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118046934
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118046934
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
118046934
microRNA pathway
RISC loading complex
118046934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
118046934
NCBI-ProteinID:
XP_034911920
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Position
1:complement(24886895..24893598)
Genome browser
AA seq
985 aa
AA seq
DB search
MSRRGGGRRSSEPRRDQGSLTPSPSFQRGGGGGRGRGRDGRGGYTPASSPTPVRAPPPAA
SGYLSATAGPSTSLTPQEMASSSTAPPPSASSSASMEELSQEIAKKLSLGSTSATGGSVP
VSSKAIVPPPRPQLGRIGRKCTIRANHFVVEVSDRDLFHYDVAITPEVTSKKVNRDVISQ
LVRSYRESHLGNRMPAYDGRKSLYTAGALPFEAKEFVVKLVEKNDPASSSSSVRKERQFN
VAIKYASKVDMHHLKEVLSGRQKDVPQETIQILDIVLRASPSEKYVTVGRSFFSLDLGPK
GELGNGIEYWRGYYQSLRPTQMGLSLNIDVSARSFYEPILVTEFVAKHFNLRDLTRPLSD
QDRVKVKRALRGIKVEISYRDYAKSFKVTGISNLPVDKTMFTLDDKKTKVSVHQYFWERY
NIGLKYTSLPPLQAGTDAKPIYLPMELCKIAGGQRYTKKLNERQVTALLRATCQRPSARE
NSIKQMVRHNDYSRNVLVRNEFGIQVKEELTSIDARVLPPPMLKYHDTGREPRVDPHLGQ
WNMINKKMVNGGRIDFWTCVSFSTRVQRDLPFEFCRQLMDMCNSKGMEVHPDPIIQIHSA
DSRQIEKALLDVHKKCTAKLANQKGKQLQLLIIILPDFSGSYGKIKRICETELGIVSQCC
QPLQAKKLSKQYLENVALKINVKAGGRNTVLNDAIQRRIPNVTDLPTIIFGADVTHPQPG
EDSSPSIAAVVASMDWPEVTKYRGLVSAQAHREEIIQDLYKKYQDPEKGLVHSGMIRELF
IAFRRSTGQKPHRIIFYRDGVSEGQFSQVLLHEMQAIREACGTLEVGYCPRVTFVVVQKR
HHTRFFPADHNKRDQTDKSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPTHYHVL
FDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGEISDSGSTS
ATGRSVEARSLPVVKENVKDVMFYC
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgtggtggtggccggcgatcttcagaacctcgccgtgatcagggctcctta
actccgtcaccgtcttttcagcgcggtggtggtggaggtcgtggtagaggccgtgatgga
agaggcggctacactcctgcttcgtctccaacacctgttcgtgctcctccccctgctgca
tccggctacctttctgcaaccgcaggtccttcaacctcactaactccccaagaaatggct
tcatcttcgactgcgccaccgccctcggcttcgagttcggcttcgatggaggagctgagt
caagagatcgcaaaaaagttgtcacttggaagtaccagtgcgacgggagggtcggtgcct
gtatcatcaaaggccattgtgcctccgccccggccacaacttggaaggataggaaggaaa
tgtacgatcagagcaaatcattttgtagttgaggtttctgatagagatctctttcactac
gatgtggcaataactcctgaagttacatcgaagaaggtaaatagagatgtaatatcccag
cttgttcgttcttatcgcgagtctcacctaggcaatcggatgccagcttatgatggcagg
aaaagtctatacactgctggggcattgccttttgaagcaaaggaatttgtcgtgaagttg
gttgagaagaatgatcctgctagttcatccagttctgtcagaaaggaacgtcaatttaac
gtggcaatcaaatatgcatccaaagttgatatgcatcatttaaaggaagtcctaagtggc
agacaaaaggatgttccacaggaaaccatacaaatccttgacattgttctcagagcatca
ccatcagaaaagtacgttactgttgggaggtcattcttctcgcttgatttgggcccaaaa
ggcgagcttggtaatggaatagaatactggagaggttattatcaaagtcttcggccaacc
caaatgggactctctttaaatattgatgtgtcagccagatccttttatgagccaattttg
gtgactgagtttgtggccaagcacttcaatcttagagacttgacaaggcctctttctgat
caggatcgtgttaaggtgaaaagggccttgagaggaatcaaagtggaaatttcatacagg
gactatgctaaaagcttcaaggttactggcatatctaatctaccagtagataagacgatg
tttactctggatgataagaaaacaaaggtgtctgtccatcagtatttctgggagagatac
aatattgggctgaaatatacatctttgcctccgcttcaagctggaaccgatgcgaaacct
atttatttgcccatggagctctgtaagattgctggaggacagcgatacacgaagaaacta
aatgaaagacaagtcactgctcttttaagagcaacctgtcaacgcccttctgctagggaa
aatagcattaagcagatggttcggcataacgattatagtaggaatgtgcttgtaaggaat
gaatttggtattcaagtgaaagaagaactaacatcaattgatgcccgagttttaccccct
cctatgcttaaatatcatgatacagggcgagaacctagagtggatccacacttaggacaa
tggaatatgataaacaagaaaatggtgaatggaggcagaattgatttctggacctgtgtg
agcttttctacaagagtgcagagagacttgccatttgaattttgtaggcaattaatggat
atgtgcaacagcaaaggaatggaagtccacccagatcccattattcagatacattcagct
gattccaggcaaattgagaaagctcttcttgacgttcataagaaatgtactgcaaaactt
gcaaatcagaagggcaaacagcttcaactgctgatcattatcctacctgatttcagtgga
tcctatgggaaaatcaaacgtatttgtgaaactgagctgggaatagtttcacaatgctgt
cagcccctgcaggcaaagaagctcagcaaacaatacctggaaaatgttgctctcaaaatt
aatgtgaaggctggtggacggaacactgtgttaaatgatgctattcaaagaagaattcct
aacgttactgatcttcctactattatttttggtgctgatgtgacccatccgcagccaggg
gaagactctagcccgtcgattgcagcagtagtggcttctatggactggccagaggtaacc
aaatatagaggacttgtctctgcacaggcccaccgggaggaaattattcaggatctttac
aaaaaatatcaggatccagaaaagggattagttcacagcggaatgatcagggaactgttt
attgcattcagaagatcaacaggccaaaagcctcatagaattatattctatagagatggt
gtaagtgaaggccaattcagccaagttctgctacatgagatgcaggcgatacgagaggca
tgtggcaccctggaagtaggatattgtcctcgggttacctttgttgtagtgcagaaacgg
catcatacacgcttctttcctgctgaccataacaagcgtgatcagactgacaagagtggc
aatatcctaccaggcacagtcgtggacactaaaatttgccaccctacagagtttgatttc
taccttaacagtcacgctggaattcagggaactagcaggcctacacactaccatgtgttg
tttgatgaaaacaacttcactgctgatggcttacaaaccctcactaacaatttgtgctac
acgtatgcaagatgcactcggtctgtttccatagtgccccctgcatactacgcccatttg
gcagcttttagggctcggtattacattgagggtgaaatatcagacagtggttctactagt
gctactgggaggagtgtggaggcccgatctcttccagtcgtcaaagaaaatgtcaaggat
gttatgttttactgttga
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