Populus alba (white poplar): 118046936
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Entry
118046936 CDS
T07314
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
palz
Populus alba (white poplar)
Pathway
palz03030
DNA replication
palz03410
Base excision repair
palz03420
Nucleotide excision repair
palz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118046936
03410 Base excision repair
118046936
03420 Nucleotide excision repair
118046936
03430 Mismatch repair
118046936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
palz03032
]
118046936
03400 DNA repair and recombination proteins [BR:
palz03400
]
118046936
DNA replication proteins [BR:
palz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118046936
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118046936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
PTCB-BRCT
RCF1-5-like_lid
Rad17
AAA_22
AAA_30
cpSF2-GREB1
AAA_19
RuvB_N
Sigma54_activ_2
RNA_helicase
BRCT_2
nSTAND3
AAA_assoc_2
AAA_18
ASFV_p49
AAA_5
AAA_14
AAA_24
AAA_17
AAA_6
Zeta_toxin
AAA_16
NTPase_1
TsaE
AAA_28
Gp44_lid
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
118046936
NCBI-ProteinID:
XP_034911921
LinkDB
All DBs
Position
1:complement(24918807..24930589)
Genome browser
AA seq
969 aa
AA seq
DB search
MQRDIRKWFMKAHDKGNDNAATNAEKKPPPTEPKTETPVCGGQEGSGRRKTSKYFAANKQ
KQKEDKEVEDLPAKRKAQNDGVRSVKPPPSKKVHKVDDEEEDDDFSLPKKKNDASPSKKL
KSSSGRGIAQKPVHVNESDEDDVKDTESPLKSGGRGRGGRGVSGAPSGGRGRGGGRGGFM
NFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSK
KTSYLLCDEDIEGRKSSKAKELGTPFLTEDGLFDKICSSKNSKAPAREDSKVSVEKVASL
PKKSPQKADLKSSSLMSNAAHKDLGAGSQQAKQKDQAIQRSSLIWTEKYRPKVPNEMIGN
QSLVTQLHNWLKNWNEQFHDTGNKGKGKKQNDSTAKKAVLLSGPPGIGKTTSAKLVSKML
GFQAIEVNASDNRGKADAKIFKGISGSNANCIKELISNEALGFEMDRSKHLKTVLIMDEV
DGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKR
LIQVANAEGLQVNEIALEELAERVNGDMRMALNQLHYMSLSMSVINYDDVRQRLQGSAKD
EDISPFTAVDKLFGFSGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPSSLGKDDNGMK
RMSLIARAAESIADGDIINVQIRRYRQWQLSQTGSLSSCIIPAALLHGSRETLEQGERNF
NRFGGWLGKNSTAGKNLRLLEDLHVHLLASRESNMARETLRLDYLTVLLKQLTDPLRVLP
KDEAVEKVVEFMNVYSISQEDMDTIVELSKFQGHGNPLDGIPSTVKAALTRAYKEERKSR
MVRAADLVTLPGKKKAPKKRVAAILEPSDDGLREENGDALAESEEENSSDTEDMEGTGNG
EKLQSELQSLNSKGIQVEVELKCGKESSKSKKTPTGRGKGGSASTEKKPAGRGRGGSGSS
EKPGAKRKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagatattcgaaaatggtttatgaaggcacacgataaaggcaatgacaatgct
gctaccaatgctgagaagaaacctcctccaactgagccgaagaccgaaacacctgtgtgt
ggaggtcaagaaggttcagggaggaggaaaactagcaagtattttgcggcaaataaacag
aagcaaaaagaggataaagaagtagaggatcttcctgctaagagaaaagctcaaaatgat
ggtgtccgatctgtgaaacccccaccttctaaaaaggttcacaaagttgatgatgaagaa
gaagatgatgacttttccttgcccaagaagaagaatgatgcttctcctagtaagaaattg
aagagcagttcaggcagggggattgctcagaaacctgtacatgttaacgaaagtgatgaa
gatgatgtgaaggatactgaatctcctctgaaatctggtggcagaggtcgtggtggtagg
ggtgtgtctggggcaccatctggtggaaggggcagaggtggtggacggggaggatttatg
aactttggtgagaggaaagatcctccacacaaaggagaaaaggaagtccctgaaggtgct
cctaattgtttagctggtttaacttttgtgattagtggaacgcttgacagtttggaaaga
gaagaggcagaagacttgattaaaaggcatggaggtcgtgttactggatctgtcagcaag
aaaacgagttatcttttatgtgatgaggatattgagggacggaaatcttcaaaagccaaa
gaacttggcacaccttttcttaccgaggatgggctgtttgataagatctgctcctcaaag
aattcaaaagccccggcacgagaagactcaaaggtgtctgtggagaaagtcgcatctctg
ccaaagaaaagtcctcagaaagcagacttgaagagtagctctttgatgtcaaatgcagcc
cacaaagatttgggtgcaggttcccagcaagcaaagcagaaagatcaagctatacaacgc
tcatccctaatatggacagaaaaatataggccaaaggttccaaatgagatgataggaaat
cagtcactggttactcagctccataattggttgaagaactggaatgagcagttccatgat
actggaaacaagggaaagggcaaaaaacaaaacgattctaccgcaaaaaaagctgttcta
ttgagtggaccacctggaatagggaaaacaacatcagcaaagctggtctctaaaatgctc
ggtttccaggcaattgaggtaaatgccagtgacaatcgtgggaaggcagatgccaagatt
tttaaaggaatcagtggaagcaatgcaaattgcataaaggaacttatcagcaatgaagct
ctgggttttgagatggataggtcaaagcatctgaaaacagttttgatcatggatgaggta
gatggaatgtctgctggagatagaggtggagttgctgatcttattgctagtataaagatt
tccaaaattcctatcatctgcatctgtaatgaccgttatagtcagaagctaaaaagtctt
gtgaactattgcttgcttctcagtttccggaagcctacaaaacaacagatggcaaagagg
ttaattcaagttgcaaatgcagaaggccttcaagttaatgagattgcacttgaggagctt
gcagaaagggtgaatggagatatgcgcatggcattaaaccaattacattatatgagcctc
tcaatgtcagtcattaattatgatgatgtaagacagcgccttcaaggaagtgcaaaagat
gaagatatttcaccattcaccgctgtggataagctgtttggctttagtggaggaaagctg
agaatggatgagcggattgacctcagtatgagtgatcctgacttggtccctcttcttatc
caggaaaactacattaattataggccaagttcacttggtaaagatgacaatgggatgaaa
cgtatgagcttgattgcacgtgctgctgagtctattgccgatggagatataataaatgtg
cagattcgaagatatcgacagtggcagctctctcaaactggttctctgtcatcctgtatc
attcctgctgcattgttgcatggatcaagggagacacttgaacagggtgaacggaatttt
aatagatttggtgggtggctgggaaagaattcaacagcgggcaaaaatttgaggctattg
gaggatctgcatgttcatctccttgcttctcgtgaatctaatatggcgagggagacactt
cgacttgactaccttacagttcttctgaaacaattgacagatcctcttcgggtgctgcct
aaggatgaagctgttgagaaggttgtggagttcatgaatgtatactcaataagtcaggag
gatatggataccattgtggagttatcaaaatttcaggggcatgggaatccattggatggc
ataccatcaactgtcaaagcagctctgactagagcatataaagaagaaagaaaatcaagg
atggtacgagctgcagatttagtaacacttcctggaaagaagaaggcccctaagaagcgt
gttgcagcgattctagaaccttctgatgatggtctaagagaggaaaatggtgacgcgttg
gctgaaagtgaagaagaaaactcatctgacacagaggatatggaaggaactggtaatggc
gagaagctgcaatctgagcttcagagtttaaattcaaaaggaatccaagtagaggttgaa
ctgaagtgcggaaaggaaagttcaaagtctaagaagacccctacaggaagaggaaaaggt
gggtctgcatctaccgaaaaaaaaccagcaggcagagggagaggtggttccggttcatca
gagaaacctggagctaagagaaagagatga
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