Populus alba (white poplar): 118047022
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Entry
118047022 CDS
T07314
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118047022
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
118047022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
AAA_29
BORCS7
AAA
ABC_tran
AAA_27
Motif
Other DBs
NCBI-GeneID:
118047022
NCBI-ProteinID:
XP_034912051
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All DBs
Position
1:complement(30771578..30785990)
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AA seq
1057 aa
AA seq
DB search
MKRPSTREEPPSKRAKTSRGEDDYMPGNIIEIELRNFMTYDCLVCKPGSRLNLVIGPNGS
GKSSIVCAIALGLGGEPQLLGRATSIGAYVKRGEESGHIKISLRGSTKDEKITIIRRIDA
HNKSEWLFNGKVASKKEVIEIMQQFNIQVNNLTQFLPQDRVCEFAKLSPVQLLEETEKAV
GDPQLPIQHRALVDKSRELKTIEMAVKRNGETLNQLKALNAELEKDVERVRQREVLLKKA
ESMKKKLPWLKYDAIKADYLKAKEAEKDVKQKLEEAAKTLNNLREPIEKQKLEKPQMDAK
CKRLSNLIKENAKRRMELLEKESSLGVQIRGKYKEMGDLKKEEESRQQRIIKAKEDLAIA
EAELRNLPVHEPPKDVLDKLRSQISDLKVSANQKRIQKQDKEKVLNQKNIALRHCVDRLK
DMENKNNKLLQALRNSGAEKIFEAYHWLREHRQELNKEVYGPVLLEVNVSNRDHADYLEG
HVPYYIWKSFITQDPRDRDFLVRNLKSFDVPILNYVGDKYRHKEPFFISNEMRELGIYSR
LDQVFEAPDAVKEVLISQFGLEHSYIGSKETDQKASEVAKLRVLDFWTPENHYRWSVSRY
GGHVSGSVDPVDRSRLLLCGSDVGEIERLRCRKEELEETVCALEEDLKLLMTEQRSIDEE
EAKLHKQREEIVSNVTLEMRKRREMENRVDQRKRKLESLLREDDQDAVMAKLIDEAANLN
TRRLQCAIDIKNLLVEAVAYKWNFAEKHMTSIEFDAKIRELEHGLKQPAKFAQQVACQLE
YCKKETEDHRQQLLAAKRHAESIAIITPELEKAFLEMPTTIEELEAAIHDTLSQANSTLS
LNQNVVEEYEHRQGKIEAITKKLEADKEELKKCLAEIDALKESWLPTLRSLVTQINETFS
HNFQEMAVAGEVSLDEHDNDFDQFGILIKVKFREAGQLQVLSAHHQSGGERSVSTILYLV
SLQDLTNCPFRVVDEINQGMDPTNERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSEA
CSILNIMNGPWIEQPSKAWSSGECWGAVTGLLGESRC
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggccttcaactagggaggaacctccctcaaaacgcgccaaaacctccagagga
gaagatgattacatgcctggaaacataattgaaattgaacttcgtaacttcatgacttat
gattgtttggtttgcaaacctggatcacgcctgaaccttgtaattggaccaaatgggtcg
ggtaagagctcaattgtgtgtgccattgcacttggacttggtggtgagcctcagctgctt
gggagggcaacgagtattggggcatatgtgaagcgcggggaggagtctgggcacatcaaa
atatccttgagaggaagtacaaaagatgagaagattaccataattcgcagaattgacgca
cataacaagtccgagtggttgttcaatggaaaagtggcatctaagaaagaggtcattgaa
atcatgcaacaattcaacatccaagtcaacaatttgactcaattcttgccacaagatagg
gtatgtgaatttgcaaagttatctcctgtgcaacttctagaagagactgaaaaggctgtc
ggtgatcctcaacttccaatccaacaccgtgctcttgttgataaaagtcgtgaactgaag
actattgaaatggctgttaagaggaatggggaaacattgaatcagctgaaagctcttaat
gctgagcttgaaaaagacgtggagcgtgtcagacaaagggaagtgcttctaaagaaggct
gaatccatgaaaaagaaattgccatggctgaagtatgatgcgataaaggctgactatttg
aaagctaaagaggcagaaaaggacgtaaaacagaagctggaggaagctgcaaaaactttg
aataacttgagagaacctatcgaaaaacaaaagcttgaaaaaccccaaatggatgctaaa
tgtaaaagattaagcaatctcataaaggaaaatgctaagcgacgtatggagttactggag
aaggaaagcagtttgggggtgcaaattcgtggaaaatacaaggaaatgggagacttgaag
aaggaagaagaatcacgccaacaaagaatcataaaagctaaagaggatcttgcgattgct
gaagcagaacttcgaaatttgcctgtccatgaacctccaaaagatgtgcttgataaatta
cgttctcagatttctgatctaaaagtctctgcaaatcaaaaaagaattcagaagcaggac
aaggagaaagttttaaatcaaaagaacatagcactgaggcattgtgttgacaggctgaag
gatatggaaaataaaaacaataagctcttacaagcattaagaaattctggagctgaaaag
atatttgaggcttatcattggctacgagaacatcgtcaggaattgaataaggaggtctat
gggcctgttttgcttgaggttaatgtctctaatcgggatcatgctgactacttggaaggt
catgtcccatattatatctggaagtctttcataacccaagatcctcgtgaccgggacttt
ttggtaagaaacctgaagtcatttgatgtgccgattttaaactatgtgggagataaatat
cgtcataaggagccttttttcatttccaatgagatgcgtgagcttggcatctattcacgg
ctcgaccaagtttttgaagctcctgatgctgttaaggaggttttgatcagccagtttggg
ctggaacattcttatattgggtcgaaggaaactgatcagaaggcttctgaggtggcaaag
ttgcgagttttagatttttggactcctgaaaatcactaccggtggtctgtttctagatat
ggtggtcatgtatcaggaagtgttgatccagttgatcgctcacgtcttcttctctgtggt
tcagatgttggggaaattgaaaggctgagatgcaggaaagaggagctggaagaaactgtt
tgtgctttagaggaggatttaaaattgctgatgactgagcaaagatccatagatgaagaa
gaggctaaacttcataaacagcgggaggagattgtcagcaatgtgacattggagatgcga
aaacggcgtgaaatggagaaccgtgttgatcaaaggaaaaggaaactagagtcattgctg
agggaggatgaccaggatgctgttatggcaaaactgattgatgaggctgcaaaccttaac
actcggcggttgcaatgtgcaattgatattaagaatttactcgtcgaggctgttgcttac
aaatggaattttgctgaaaaacacatgacctccattgagtttgatgcgaagattagagaa
ctggaacacggtctgaagcagcctgcaaaatttgctcaacaagtagcatgccaattggag
tattgcaagaaggaaacagaggatcatcgacagcaactcttggctgctaaaagacatgca
gaatcaattgctatcatcactccagaactcgagaaggcttttcttgagatgccaacgact
attgaggaattggaggctgctattcatgatactttatctcaagccaattccactctttcc
ctgaaccagaatgtggtggaagaatatgaacaccgtcagggaaagatagaagccattacc
aaaaaacttgaagctgataaagaagaactaaaaaagtgtttagctgaaatagatgccttg
aaggagagttggcttccaacattgagaagccttgttactcagattaatgaaactttcagc
cataacttccaggagatggcagttgcaggagaagtttcattggatgagcatgacaatgac
tttgatcaatttggaatattgataaaagtgaagttcagagaagcaggacaacttcaagtt
cttagtgctcatcatcaatctggaggggagcgttcagtttcaaccattctgtatcttgtt
tcacttcaagacctcacaaactgcccgtttagggtagttgatgagataaatcaaggaatg
gaccccacaaacgaaagaaagatgtttcagcaactagtgagagctgcaagccaaccaaac
acaccacagtgtttcttactcaccccaaagttactacctaatttggaatacagcgaggca
tgtagcattcttaatataatgaatggaccttggattgagcagccttccaaagcatggagc
agtggagaatgttggggggctgtcacagggcttttgggagaaagtcgatgctga
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