Populus alba (white poplar): 118047062
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Entry
118047062 CDS
T07314
Name
(RefSeq) putative RING-type E3 ubiquitin transferase C3H69
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118047062
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118047062
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118047062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_2
zf-CCCH_DUS3L
zf-C3HC4
zf-RING_2
zf-CCCH_RBM22
zf-CCCH_3
RING_XB3-XBAT31
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf-CCCH_9
zf-CCCH_PARP12
zf-C3HC4_2
zf_Tbcl_2
FANCL_C
zf-rbx1
IBR_1
Motif
Other DBs
NCBI-GeneID:
118047062
NCBI-ProteinID:
XP_034912117
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All DBs
Position
1:31205831..31213157
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AA seq
360 aa
AA seq
DB search
MSKRVLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGICSYGSRCRYEHVKPSRPE
STASSSLTVPRQPLGSNSVSLALTARNVSNGVSTVPGVPPELSYRPFIAPTVPEWNLESA
QHDFLEDGEVIEPRNVKPADRSICSFAAAGSCPRGDKCPHIHGDLCAYCGKHCLHPFRPE
ERDEHLKACEKKQKNLDLLKYSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCI
RNWRSSSPTSGMDVNTSLRACPICRKLSYFVIPSVIWYSSKEEKQEIVDTYKAKLRSIDC
KHFDFGNGNCPFGTSCFYKHAYRDGRLEEVVLRHLGADDGQAVIAKNIWLSDFLGSLQIR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaagggtactttgcaagttttttgctcatggggcatgcttgaaaggggagcat
tgtgaattttcacatgattggaaagatcctccaaataatatttgcaccttttatcaaaaa
ggtatctgctcgtatggtagtcgatgccgatatgaacatgttaaaccttctaggcctgaa
tctactgcatcatcttcgttgacagttcctcgtcaacctctgggctcaaattccgtgtcc
ctggccctcactgcaagaaatgtatcgaatggggtgtcaacagtaccgggtgttcctcca
gagctttcatatcgaccctttattgctcccactgtaccagaatggaatttggagtctgca
caacatgacttcttagaagatggtgaggttatagagcctaggaatgttaaaccagctgac
cgatctatctgttcatttgctgctgctggaagttgtcctcgtggagataaatgcccccat
attcacggtgatttgtgtgcctattgtggaaagcattgcttacaccctttcagacctgaa
gaaagagacgaacatttgaaagcatgtgagaagaagcaaaagaaccttgatttgttaaaa
tatagtcaagaaatagaatgcagtgtatgcctggatcgtgtactttcaaagcccacggca
gctgaacgaaagtttggtctgctatcagaatgcgatcatccattctgcatatcatgtatt
aggaactggcgtagtagttccccaacctctggaatggatgtcaatacttcattgagggct
tgtccaatatgtcgcaagctttcatactttgtcattccaagcgttatttggtattcctct
aaagaggaaaaacaggaaattgttgatacctacaaggcaaaactcaggtcaatagattgt
aaacacttcgactttgggaatgggaactgcccatttggaaccagctgtttttacaagcat
gcatatcgagatggccgcttggaggaagttgttttacgtcatcttggagctgatgatgga
caggctgtgatagctaaaaatatctggctgtctgatttcctcggtagcttacaaataagg
tga
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