KEGG   Populus alba (white poplar): 118047068
Entry
118047068         CDS       T07314                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
palz  Populus alba (white poplar)
Pathway
palz03018  RNA degradation
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118047068
  09123 Folding, sorting and degradation
   03018 RNA degradation
    118047068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:palz03019]
    118047068
   03041 Spliceosome [BR:palz03041]
    118047068
Messenger RNA biogenesis [BR:palz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     118047068
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     118047068
Spliceosome [BR:palz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    118047068
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 118047068
NCBI-ProteinID: XP_034912125
LinkDB
Position
1:complement(31307578..31309950)
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcagggaggaaagaaacagtattggatttggctaagttcgtggacaagggtgttcaa
gtcaagctcactggtggtagacaagtgacagggactttgaagggatatgaccaattacta
aaccttgtcctggatgaagcagtagaatttctaagagatgctgatgatccgctaaagacc
actgatcagacaaggcgccttggcctaattgtttgcaggggaactgctgtgatgctggtg
tcaccaactgatggtacagatgagattgccaacccctttgtccagccagatggagcctag

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