Populus alba (white poplar): 118047068
Help
Entry
118047068 CDS
T07314
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118047068
09123 Folding, sorting and degradation
03018 RNA degradation
118047068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118047068
03041 Spliceosome [BR:
palz03041
]
118047068
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118047068
mRNA degradation factors
5'-3' decay
Lsm complex
118047068
Spliceosome [BR:
palz03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118047068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
118047068
NCBI-ProteinID:
XP_034912125
LinkDB
All DBs
Position
1:complement(31307578..31309950)
Genome browser
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDADDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFVQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaggaaagaaacagtattggatttggctaagttcgtggacaagggtgttcaa
gtcaagctcactggtggtagacaagtgacagggactttgaagggatatgaccaattacta
aaccttgtcctggatgaagcagtagaatttctaagagatgctgatgatccgctaaagacc
actgatcagacaaggcgccttggcctaattgtttgcaggggaactgctgtgatgctggtg
tcaccaactgatggtacagatgagattgccaacccctttgtccagccagatggagcctag
DBGET
integrated database retrieval system