Populus alba (white poplar): 118047163
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Entry
118047163 CDS
T07314
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118047163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118047163
03110 Chaperones and folding catalysts [BR:
palz03110
]
118047163
03029 Mitochondrial biogenesis [BR:
palz03029
]
118047163
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
palz04147
]
118047163
Enzymes [BR:
palz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118047163
Messenger RNA biogenesis [BR:
palz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118047163
Chaperones and folding catalysts [BR:
palz03110
]
Heat shock proteins
HSP60 / Chaperonin
118047163
Mitochondrial biogenesis [BR:
palz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118047163
Exosome [BR:
palz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118047163
Exosomal proteins of other body fluids (saliva and urine)
118047163
Exosomal proteins of breast cancer cells
118047163
Exosomal proteins of colorectal cancer cells
118047163
Exosomal proteins of bladder cancer cells
118047163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DD_K
Motif
Other DBs
NCBI-GeneID:
118047163
NCBI-ProteinID:
XP_034912245
LinkDB
All DBs
Position
10:complement(14381308..14386978)
Genome browser
AA seq
592 aa
AA seq
DB search
MACSPSLISAISLTNPTRLKRVSYPSMLSPKAMAKEIHFNHDGSTTKKLLAGVEMVSELL
GVTLGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNNLAGD
GSTTSVVLAHGLIAEGQKVIASGMNPVQIARGIAKTSEALVSELKLMSREVENDELADVA
AVSAGNDYTVGNMISDALQQVGRRGVVTIEKGRCTENILEIVEGMQFDRGYLSPYFVTDR
QRMVVEFHNCKLLLVDKKIQNAKEVFKILDNAVKEMYPIVIVAEDVDQEALAPIIRNKLK
GLLKGAAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLKLEKAGKEVLGTATKVVITKD
STLIVTDGSTREAVEKRVSQICSLVENTEEKFQKKILNERIARLSGGIAILQVGAQTQVE
LKDKLLRIEDALNATKAAIEEGVVVGGGCSLLRLSTKVDGIKELLDNEEQKIGAEIFKRA
LSYPARLIAKNAGVNGNVVINQVLSNADIRYGYNAATDTYEDLITAGIIDPTKVVRCCLE
HATSVAKTFLTSDAVIVDIKESDPLPMRRRMPPVAPPPMPKSPGVGPVGVYL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcatgctctccatctctaatctctgcaatatctctcactaacccaacaaggctcaag
agggtctcctatccttctatgttaagcccgaaagccatggccaaggaaattcacttcaac
catgatggttctaccacgaagaaacttctggcaggggtggagatggtgtcagagttatta
ggagtgactttaggaccgaaaggaaggaatgtggtgttgcagaacaagtatggacctccc
aagattgttaatgatggagaaactgtcctcaaagagattgaactggaggatcccttggag
aatgttggagtaaaattggtgaggcaagctggtgcgaaaacaaataaccttgctggtgat
ggttcgacaacatctgtggttcttgctcatggtttaatcgctgagggtcaaaaggtgatt
gcatctggcatgaatcctgttcaaattgctcgtgggattgcgaaaacctcggaagctctt
gtatctgagctcaaattgatgtcgagggaggttgagaacgatgagcttgcagatgtggct
gcagttagcgcagggaatgattatacagtgggaaacatgatatccgatgcacttcaacaa
gtgggaagaaggggagtagtcacaattgagaaaggaaggtgtactgagaacatcctagaa
attgtagaaggaatgcaattcgatcgtggatatttgtctccttacttcgtaactgatcgg
caaagaatggtagtggagttccacaactgcaagctactcttggttgacaaaaaaatacag
aatgcaaaggaggtgttcaaaatattggataatgcagttaaagagatgtacccaattgta
atagttgcagaggatgtggaccaggaagctctggctccaatcattaggaacaaactcaag
ggtctattgaagggagctgctattaaagctcctgcctttggtgaacggaagagccactac
ttggatgacatcgctatcttgacaggaggcactgtaattagagatgacatggggctgaag
ctagaaaaggctgggaaggaggtgttgggcactgctactaaggtggtgataacaaaagat
tctacgttgatagtaactgatgggagcactcgagaagctgtggagaaaagggtttctcag
atatgtagtcttgttgagaacactgaagaaaaatttcaaaagaaaatattgaatgaaaga
atagcaaggttatctggagggattgctattctccaggtaggagcacagacacaagtcgag
ttgaaggacaaactgctgagaattgaggatgctttaaatgcaaccaaggcagcaatcgag
gaaggtgtagtagttggaggtggttgtagccttttgaggctatcaactaaggtggatggt
attaaagaacttttggataatgaagagcagaagattggagctgagatcttcaaaagagct
ttgagctatcctgcacgattaatagctaagaatgcaggtgtaaatggaaatgtcgtcata
aaccaggttttgtcaaatgctgatataagatatggatacaatgctgcaacagacacctac
gaggatttgataactgctggaattatagatcccacaaaggtggttagatgttgtttggag
catgcaacatcggtggccaagacattcctgacatccgatgctgtcatagttgacatcaag
gaatcggatcccctcccaatgaggagaagaatgccaccagtagcccctcctcctatgcca
aaatccccaggtgttggaccagttggcgtatacttatag
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