Populus alba (white poplar): 118047313
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Entry
118047313 CDS
T07314
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16282
E3 ubiquitin-protein ligase RHA2 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118047313
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118047313
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118047313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_Vps41
zf-RING_4
zf-RING_16
zf_RING_Vps8
Prok-RING_1
U-box_ZFPL1
zf-C3HC4_4
zf_RING_Vps8_fungal
PHD
zf-Nse
Prok-RING_4
zf-RING-like
Rtf2
Motif
Other DBs
NCBI-GeneID:
118047313
NCBI-ProteinID:
XP_034912465
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All DBs
Position
10:14282448..14282849
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AA seq
133 aa
AA seq
DB search
MFIKYFNLIVAHLRWAFNFLCYYPFSFQEHELFAVPEIGEELNTVINEAPAECAVCLSDV
EEGEEIRELRCGHIFHRACLYRLLDFRQSTCPLCRGSLAPRRTIILDQHRTEVLTFKFCS
VTSTDERDTWWLR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcaaatacttcaatctcattgttgcccatctcagatgggcatttaatttcttg
tgttactatccgttcagcttccaagaacacgaattgtttgctgtgcctgaaatcggtgaa
gaactaaacacggtgatcaatgaagctcctgcggaatgtgctgtgtgtctaagtgacgtt
gaagaaggcgaagaaatcagagagctgagatgtgggcatatctttcatagagcatgctta
tacagattgcttgacttccggcaatcgacttgcccactttgccgaggaagtcttgctccc
cggagaacaattatccttgatcagcaccgaacagaagtattgacgttcaagttctgttct
gtcacatccaccgatgaacgggatacatggtggctgcgatga
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