Populus alba (white poplar): 118047385
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Entry
118047385 CDS
T07314
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
palz
Populus alba (white poplar)
Pathway
palz04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
118047385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118047385
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118047385
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
118047385
NCBI-ProteinID:
XP_034912565
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Position
4:complement(2955585..2962386)
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AA seq
586 aa
AA seq
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MGPNPKMKREFLDSTRSSPFPDEVLERVLSLLKSHKDRSAVSLVCKDWYNAESWSRTHVF
IGNCYSVSPEIVARRFPIIKSVTLKGKPRFSDFNLVPENWGADVHPWLVVFATKYPFLEE
LRLKRMAVSDESLEFLAVNFPNFKVLSLLSCDGFSTDGLAAIATHCKSLTQLDIQENGID
DKSGGWLSCFPENFTSLEVLNFANLNTDVNFDALERLVSRCKSLKVLKVNKSISLEHLQR
LLVCAPQLTELGTGSFTPELTTRQYAELESAFNQCKNLNTLSGLWEATALYLPVLYPVCS
NLTFLNLSYTFLQSLELASLLRQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPAD
PFDEEIIHGVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNP
GQPDYLTNEPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSS
DRGMQCVLEGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRLLARE
MPRLNVEVMKEDGSDDSQADKVYVYRSVAGPRRDAPPCVLTTLSGL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaaatccaaagatgaaaagggaatttcttgactcaacaaggtcatcaccattc
ccagatgaagtactggaacgagttctttcactcttgaaatcacacaaagatcgtagcgca
gtgtctttagtatgcaaggactggtacaacgcagaaagctggtcaagaactcatgttttt
ataggaaactgttattcagtctctcctgaaattgttgcacgtagatttccaataattaag
agtgttactcttaaagggaagccaagattttctgattttaatctagtacctgaaaattgg
ggagctgatgttcatccttggcttgtagtttttgcaacaaagtatccgtttttggaagag
ctgaggcttaagagaatggctgttagtgatgaaagtttggagtttttggctgttaatttt
cctaattttaaggttctttctctgttgagctgtgatgggtttagtactgatgggcttgct
gctattgccactcattgcaagagtttgactcagcttgacatacaagagaatggcattgat
gacaagagtggtggttggttaagctgcttccctgaaaacttcacatcattggaagtacta
aactttgccaatctgaatactgatgtcaattttgatgcacttgagagacttgtaagtagg
tgcaagtcactaaaggttctgaaggtcaacaaaagtatttccttggaacacctacaaagg
ctgctagtttgtgctccacaattgacagagcttggtactggttcattcacaccagagctt
acaactcgtcagtatgcggagcttgaaagtgcatttaaccagtgcaagaatttaaatact
ctttctggtttatgggaggcaacagcactatatctaccagttctgtaccctgtctgttca
aacttgactttcttaaacctgagctatacttttctgcaaagtcttgaacttgctagtctt
ctccgtcaatgtccacgacttagacgcctctgggtcctggacactgtgggggacaaaggg
ctggaggctgttggatccaactgtccattgcttgaggagctccgtgtcttccctgctgat
ccctttgatgaggaaattatccacggggtgactgaagcagggtttgttgctgtctcttat
ggatgtcgaagactccactatgttctctacttttgccggcagatgaccaatgctgcagta
gcaaccattgtgcagaactgcccggatttcacccacttccgtctttgcataatgaatcca
ggccaaccggattacttgacaaatgaacctatggacgaggcttttggggcagtggtgagg
acttgcactaaactacagaggctatctgtttcaggtctcctgacagacctgacatttgaa
tatattgggcaatatgctaaaaatctggaaactctgtctgtggcttttgcgggcagtagt
gatagggggatgcagtgtgtgctagaaggttgtccaaagttgaggaaacttgagataagg
gactgtccatttggaaatgcagcacttctttcaggtttggagaagtatgagtctatgagg
tcactttggatgtcagcctgcaatgtgacaatgaatggctgtcggttattggcaagggag
atgcccagattgaatgttgaagtaatgaaagaggatggaagtgatgactctcaggctgat
aaagtttatgtttaccgttctgttgcggggccaagaagagatgctccaccttgtgtactc
actactctctcaggcttataa
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