Populus alba (white poplar): 118047792
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Entry
118047792 CDS
T07314
Name
(RefSeq) small RNA degrading nuclease 1 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
palz
Populus alba (white poplar)
Pathway
palz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
118047792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
palz03009
]
118047792
Ribosome biogenesis [BR:
palz03009
]
Eukaryotic type
Pre-60S particles
RNases
118047792
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAM76
DUF4159
RhoGAP
DUF648
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
118047792
NCBI-ProteinID:
XP_034913057
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All DBs
Position
7:complement(6739828..6743948)
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AA seq
556 aa
AA seq
DB search
MDKNLLANRVAAASDKVLAEVVKLTQKQGRRGSQGTWKQFLNVYEKKFGSGFSDPARRSR
DSLVAFLQTFTDEDGLKFVDNVLRSLSNCETLKETMKESLENESPEQRLVRSTLEHPLYL
SKYALPTYEKGWAVTKVRKKPKLLRCNKMLAVDCEMVLCKDGTDALVRVCVVDADLKVKL
DELVNPCKPVEDYRTEITGVTAEVLDGASCSFGDIQISMKKLLSRGTILVGHSLYNDLQA
LKVDHARVIDTSFIFKSSDGRSPSLNNLCKSVLGYELRKAGDPHNCLDDACAAMKLVLAK
IERGVDNYIPLIQPDVKDASYNVPEIEMAKLLLHKIPVTVPREKLRRLFPANYTIEIKTH
KVIQGVGYSVLAIFKNPEEACQAFENLIGSLEKDTSGRPQKLVALQLDTGGSAGIRVRKM
THDSHVSQKKRSFEGEDSSDPKKPKIGQCDDHLKEIERLKQELEKQELNQCDDHSKEIER
LKQEIKTKDFEITAQDKIITELKRKLEEMKKKNKETLRIVSRIFKSVAAHEVGNQTLLAI
DKAAKENRLPGQKKCD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaacctcctcgccaacagagtagccgccgcgtcggataaggtgcttgctgaa
gtggtgaagttaactcaaaagcaaggaaggagaggtagtcaaggaacctggaagcagttt
ttaaatgtttatgagaagaagtttgggtctggctttagtgatccggcgagaaggtcacgg
gattcactcgttgcgtttcttcaaacttttactgatgaggatggcttgaagtttgttgat
aatgtgcttcggtcgctttcgaattgtgagacgttgaaagaaactatgaaagaatctctg
gaaaatgaatcacctgaacagaggctggttcgttcaactcttgaacatccactttacctg
tcaaagtatgcacttccaacgtatgagaagggatgggcagtaacgaaggtccggaaaaag
cccaagctgctaagatgtaataaaatgcttgctgttgattgtgagatggttctctgtaaa
gatggtaccgatgctttagtgagggtgtgtgtggtggatgcagatttaaaggtaaaactt
gatgaattagtgaatccatgcaaaccagttgaagattatagaactgagattactggagtt
actgctgaagttttggatggagcgtcttgttcatttggagatatacagatatccatgaag
aagttattatcgaggggaactattttagtgggccatagtttatataatgacctacaagca
ctaaaggtagaccatgcaagagtgattgatacatcatttattttcaaaagttcagatgga
cgttcaccttccttaaataatttgtgtaagtctgtgctgggctatgaacttcgcaaagca
ggtgatccacacaactgcttagatgatgcatgtgctgcaatgaaacttgttcttgctaag
atcgagcgtggagttgataattacattccattgattcaaccagatgtgaaagatgcaagt
tacaatgttccagaaatagaaatggcaaagctgctacttcacaaaataccggttactgtc
ccccgagaaaaattacgtagactgttccctgcaaactatacaattgaaatcaagacacat
aaggtgattcagggagtgggatattctgtgcttgccatctttaagaatccagaagaggca
tgccaagcatttgaaaatttgattggcagcctagaaaaggacacatctggccggccacag
aaactagtagcacttcaacttgacacgggaggatctgctggcatacgggttcgcaaaatg
acacatgatagccatgtttcacagaaaaagagatcttttgagggcgaggattcaagcgat
cccaagaaaccgaagataggccaatgtgatgaccacttgaaagagattgaaagattgaag
caagaactggagaaacaggagttaaatcagtgtgatgaccactcgaaagagattgaaaga
ctgaagcaagaaataaaaacaaaggattttgaaatcaccgcccaggataagatcataacc
gaactgaaaaggaaattggaagaaatgaaaaaaaagaataaggaaacgctaagaattgtc
agtcgcatttttaagtctgttgcagctcacgaggtaggtaatcaaaccttgcttgctatt
gacaaggctgccaaagagaatagattaccagggcaaaagaaatgcgattga
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