Populus alba (white poplar): 118047819
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Entry
118047819 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118047819
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118047819
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118047819
03036 Chromosome and associated proteins [BR:
palz03036
]
118047819
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118047819
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118047819
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118047819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
PDS5
HEAT_EZ
RTP1_C1
Adaptin_N
SCD
TAF6_C
CLASP_N
TPR_TNPO3_IPO13_3rd
Cnd1
Motif
Other DBs
NCBI-GeneID:
118047819
NCBI-ProteinID:
XP_034913115
LinkDB
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Position
10:13866938..13873485
Genome browser
AA seq
587 aa
AA seq
DB search
MSTMEEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLALAEELGVFIPYVGGVEYAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRET
DLVDWFIPLVKRLAAGEWFTSRVSACGLFHIAYPSAPEMLKTELRSIYSQLCQDDMPMVR
RSAASNLGKFAATVESVHLKADILSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRMDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPEHAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMEHIIPQV
LEMSTNPHYLYRMTIIRAVSLLAPVMGSEITCSKLLPVVVNASKDRVSNIKFNVAKVLQS
LIPIVDQSVAEKTIRPCLVELSEDPDVDVRFFANQALQTIDSVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgatggaagaaccactatatccaatagccgttttgatagatgagttaaagaat
gatgacattcagctacggttaaactcaatacgtagactatcgactattgcacgtgctctc
ggggaggaacgaacccggaaggagttaattccatttttgagtgaaaataatgatgatgat
gatgaggtactccttgcattggcggaggaattgggggtgtttattccttatgttggggga
gttgagtatgctcatgttttgctcccacctctggagactctctgcactgttgaggaaacc
tgtgtgagagataaagctgtggagtcgctgtgtaggattggatctcagatgagggagact
gacctggttgattggttcattcctcttgtcaagagactggcagctggggaatggtttacc
tctcgagtttctgcatgtgggctatttcatattgcctaccctagcgccccagagatgttg
aagacagagttgcggtcaatatacagtcagttgtgtcaagatgacatgcccatggttagg
aggtctgcggcctctaatttggggaaatttgctgccactgttgaatctgtgcatttgaag
gctgacatcctgtcaatttttgaggatcttacccaagatgatcaagattctgttcgttta
ttggctgtcgagggttgtgctgctcttgggaaattattggagcctcaggattgtgttgca
cacattcttcctgttattgttaatttctctcaggacaagtcttggcgtgtacgctacatg
gttgcaaatcaactatatgaactttgtgaagctgtggggcctgagcctaccaggatggac
ttggtccctgcatatgtgcggttacttcgtgataacgaggctgaagtacgtatagcagct
gctggaaaagtaactaaattctgccgcattttaagtccagaacatgctattcagcatatt
ctcccctgtgtgaaggaactgtcatcagattcttcccagcatgtccgctctgctttggct
tccgttataatgggaatggctcctgtcttgggaaaggatgcgacaatcgaacagcttctt
ccaatttttctatccctcttaaaggatgaatttcctgatgtgcgactgaacattatcagc
aagcttgatcaagtcaatcaggttattgggattgatctactatcccaatcactattgcca
gcaattgttgagcttgcagaggataggcattggagggttcggcttgcaattatagagtac
attcctttattggcaagtcaattgggtgttgggttctttgatgataaacttggcgctctt
tgcatgcagtggttacaggataaggtttattcgattcgcgatgctgctgcgaacaattta
aagcgccttgctgaggaatttggtcccgagtgggcaatggagcacataattccacaggtt
ttggagatgagcaccaatccccattatttgtaccggatgacaattatacgagctgtctcg
ttgcttgctcctgtcatgggttcagaaattacatgttctaaactgctgccagtggtcgtc
aatgcatcaaaagacagggtgtcaaacatcaagttcaatgtggcgaaggtgctgcaatcc
ctcattccaatagttgatcagtctgttgcagagaagacaatccgtccctgtttggttgag
ctcagtgaggacccagatgtcgatgtccgttttttcgcgaaccaagctcttcagacaatt
gatagtgtcatgatgtctagctag
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