Populus alba (white poplar): 118047856
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Entry
118047856 CDS
T07314
Name
(RefSeq) uncharacterized RNA-binding protein C660.15 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118047856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118047856
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118047856
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118047856
NCBI-ProteinID:
XP_034913155
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Position
7:complement(6246369..6251150)
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AA seq
367 aa
AA seq
DB search
MDRKLVVLGIPWEIDTEGLREYMTKFGGLEDCIVMKERSSGRSRGFGYVTFVSAEDAKAV
LSSEHFLGKRMLEVKVATPKEEMRAPSKKATRIFVARIPPSVTETTFRSHFEKYGEIIDL
YMPKDHSSKAHRGIGFITYASADSVDNLMAETHELGGSTVVVDRATPKEDDFRPNGRMAP
GGYGAYNAYISAATRYAALGAPTLYDHPGPFYGRGESSRGMGKKIFVGRLPQEASAEDLR
QYFGRFGHILDVYVPKDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSATPI
DDAGPSGNFMMSGPEPFGSYAGPMRNFGRMYGTLDYDDASAYMVPSKWGYGMGSARPSRA
DWRYRPY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaaagcttgtggttttgggtattccatgggagattgataccgagggtttgaga
gaatatatgaccaaatttggtggattagaggattgtattgttatgaaggaacggtcatca
ggtcgatctcgtggttttggatatgttacttttgtgtcagctgaagatgctaaggctgtg
ctatcaagtgaacactttcttggtaaaagaatgctggaagttaaagtggctaccccaaag
gaggagatgcgagcgccttcaaaaaaagcgactaggatatttgtggccaggattccacca
tctgtgacagaaactacctttcgaagtcattttgagaaatatggggagataatagaccta
tacatgccaaaagatcatagctcgaaagcacatcgtggaattgggttcatcacatatgca
agtgcagattctgtggataatttgatggctgaaactcatgaattgggaggctctactgta
gttgtagatcgagcaacgcctaaggaagatgattttaggccaaatggaagaatggctcct
ggtggatatggtgcatacaatgcttatatttctgcggctactagatatgcagctcttggt
gctcccaccttgtatgatcatcctggaccattctatggaagaggggaatcatctagagga
atgggcaaaaagatctttgttggaaggcttcctcaggaagcaagtgctgaagatttgcgc
cagtattttggtagatttggccacatattagatgtatatgttcccaaggatcccaagaga
actggccacagaggttttggatttgtaacctttgctgaagatggtgtagcagatcgtgta
tctcgaagatctcatgagatttgtggacatcaggttgcaattgattcagccacacctatt
gatgatgctggtccaagcggaaatttcatgatgagtggtcctgaaccttttgggagttat
gctggtcccatgcgcaactttggcaggatgtatggaaccctggattacgatgatgcaagt
gcatatatggttccttctaaatggggttatggaatggggagtgcaagaccttcaagggca
gattggaggtacaggccatactag
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