Populus alba (white poplar): 118047928
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Entry
118047928 CDS
T07314
Name
(RefSeq) serine/threonine-protein kinase VPS15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
118047928
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
palz01001
]
118047928
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118047928
Enzymes [BR:
palz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118047928
Protein kinases [BR:
palz01001
]
Serine/threonine kinases: Other
VPS15 family
118047928
Membrane trafficking [BR:
palz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118047928
Autophagy
Autophagosome formation proteins
PI3K complex
118047928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
HEAT
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
NBCH_WD40
PK_Tyr_Ser-Thr
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
WDR90_beta-prop_4th
HEAT_2
Beta-prop_WDR41
HEAT_EZ
Beta-prop_CAF1B_HIR1
Cnd1
APH
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
118047928
NCBI-ProteinID:
XP_034913266
LinkDB
All DBs
Position
6:13603418..13613454
Genome browser
AA seq
1545 aa
AA seq
DB search
MGNKIARTTQASASEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DNIDLTDYHRRLINIKDTFRALDHHHVWPFQFFQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAVKQCHDKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEVQVAQDAPLLPSMDIFAVGCVIAELFLEGQQ
LFELSQLLAYRRGQYDPSQYLEKIPDSGIRKMILHMIQLEPEARLSAESYLQDYAAVVFP
SYFSPFLHNFYCCWNPLHSDMRVAICQSVFHEILKQMMGNRTSEVAGTRRDMFANSLNGK
LSEEMVEKQNLDSTSHWRNRERIENGLTCQQYNLLGDINSLLGDVKQSSGYYSAKLMPDS
APGSEFCQDLKQCSTKSPDELLQTISNAFRRNDHPFLKKITMDDLSSLMSEYDSQSDTFG
VPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSCSLYIDDEDRLQRVL
PYVIAMLSDPAAIVRSAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVR
ICYASNIAKLALTAYGFLIHSISLSKAGVLDEMSSPQNSMASFIERPGQLQRVNNDAQLS
QLRKSIAEVVQELVMGPKQTPNIRRALLQDIGNLCCFFGHRQSNDFLLPILPAFLNDRDE
QLRALFYSKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEVVIVNALDCLAILCKRGFLRK
RVLLEMIERAFRLLCYPSQWVRRSAVSFIAASSESLGAVDSYVFLAPVIRPFLCRHPASL
ASEKSLLLCLVPPVSRQVFYHDLENARSSDMLERQRKIWYNSSAQSKQWEPEDLLKGDDK
EPNSMKSWPEKERSPEDQNHDADRLEQPEDGDAKLIAMGFIANASSKVDIRDALCSEKLQ
FSGCMSPQFSGVNSFLHDKSSEGIPLYSFSMDRRAVKFPPATSDSSLQMNSLAISSSYMP
WVDPGIKSFSLASSVPAPKLVSGSFSITNGSKPFYRVVHEPESRENEQTSFFNGKYQDMG
LYGTSKGSSFTVEDAPPTDLTGLPLFARTASIPDSGWKPRGVLVAHLQEHRSAINDIAVS
SDHSVFVSASDDSTIKVWDSRKLEKDISFRSRLTYHLEGSRALCTVMLHNIAQVVVGACD
GTIHMFSVEHMSRGLGNVVEKYSGIADIKKKDIKEGAILSLLNYTSDNSDGQSVMYSTQN
CGIHLWDIRANSNAWTLKAVPEEGYISSLVTGPCGNWFVSGSSRGVLTLWDLRFLIPVNS
WKYSHVCPVEKMCLFVPPPNVTVTSTARPLIYVAAGCNEVSLWNAETGSCHQVMRVANYD
NEEMSDIPWALARPSSKTNLKLDMRRNVKPKYRVEELNEPPPRFPGIRAMLPLPGGDLLT
GGTDLKIRRWDHFSPDRSYCISGPNLNGAGNDNPYETRSSFGVQIVQETKRRHLTPKLTA
KQVLAAAATDSAGCHRDSILSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaaaatcgcgcggacgacgcaggcatcggcatcagagtactacctgcacgac
ttgccgtcatcgtataatttggtactgaaggaggtgctaggtcgaggcaggttcttcaag
tctatactgtgcaagcacgatgagggattagttctggtcaaggtttatttcaagcgtggt
gataacattgatctcaccgactaccaccgccgtctcatcaacatcaaggataccttccgt
gctcttgaccatcatcacgtctggccattccagttttttcaagaaacagataaagcagcc
tatcttttgaggcaatacttcttcaataatcttcatgatcgattgagtactcgtcctttc
ctcagtctcgttgaaaagaagtggttggcatttcagttgcttcttgcggtgaaacagtgt
catgacaagggcatttgtcatggtgatatcaaatgcgagaatgtgctggttacttcctgg
aactggctttatcttgctgacttcgcctcatttaaaccaacttacatcccttatgatgat
ccttcggatttctcgttcttctttgacacgggaggaagaaggctctgttatcttgcaccc
gagagattttatgagcatggaggcgaggtgcaagttgctcaagatgcacccctgttgccg
tccatggacatatttgctgtagggtgtgtaattgcggaactttttcttgagggtcagcaa
ctgtttgaactctcccagctccttgcttatcgtagaggacaatatgatcctagccaatat
cttgaaaagatcccagattctggaatccgcaagatgatacttcatatgatccagttggag
cctgaggcacgtctttctgctgaaagctacctacaagattatgcagctgttgtgtttcca
agctacttctcaccctttctgcataatttttactgctgctggaatccacttcattctgac
atgagggttgcaatatgccagagtgttttccatgagatacttaagcaaatgatgggaaac
aggacaagtgaggtggctggcaccagacgagacatgtttgcaaatagcttgaatggaaaa
ctatcagaagagatggttgaaaaacaaaacttggactcgacaagtcattggagaaacaga
gagagaatagaaaatggtttaacttgtcaacagtacaatcttcttggagatatcaatagc
ctgcttggggacgtaaaacaaagcagtgggtattatagtgcgaaattgatgcctgatagt
gcacctggttctgaattttgccaggatctcaagcaatgcagcaccaaatctcctgatgag
cttcttcaaactatctcaaatgcatttaggagaaatgatcatccatttctgaaaaaaatt
acaatggatgatttgagttcattgatgtctgagtatgacagtcaatcagatacctttggt
gtgccttttttaccgttacctgaagatagcatgaaatgtgaaggcatggttctgattgcc
tctctgctatgctcttgcatacgtaatgtcaagttgccacatttgaggagaggagctata
cttttattgaagtcttgttcattatatattgatgatgaagatcgcctacagcgtgtgctg
ccatatgttattgcaatgctttcggatccagcagcaatagtgcgttctgctgccttggaa
accttgtgtgacattctgcctttagttcgtgattttcctcctagtgatgcaaagattttc
cctgagtatattcttccaatgctttccatgcttcctgatgatccagaggaaagtgtgaga
atatgttatgccagcaatatagcgaagctggctttaactgcttatgggttcttgattcat
tcaataagcttgagcaaggcaggtgttcttgatgaaatgagttcaccacagaattcgatg
gcatcatttattgaaagacctgggcagctgcagagagtaaataatgatgcgcagttgtca
cagctgaggaaatcaattgctgaggttgttcaggaacttgtcatgggtccaaaacaaact
ccaaatatcaggagagcactccttcaggacattggcaatctgtgctgcttctttggccac
agacaaagcaatgactttctgttaccaatccttcctgcatttctcaatgatcgagatgag
caactaagggcattattctatagcaagattgtatatgtctgcttctttgtgggccaaaga
agtgtggaagaatatcttttaccttacattgatcaagctttaagtgatcaaactgaggtt
gtcattgtaaatgcattagactgcttggcaattttgtgtaaacgcggcttcctacggaag
cgggtactgcttgaaatgatagagcgcgcctttcgattgttatgctatcctagtcaatgg
gttagaaggtcagctgtctctttcattgctgccagcagtgagagtttaggagcagtagat
tcatatgttttcctagcaccagttatacgcccgttcctttgcagacatccagcttctcta
gcttcagagaagtctctacttttatgtttggttcctccggtttcaagacaggtgttttac
cacgacttagaaaatgcccggagttcagacatgttagagagacagaggaaaatatggtac
aattcatcagcccagtcaaaacaatgggaacctgaggatttgctcaagggagatgataag
gaaccgaattcaatgaagagttggcctgaaaaggaacgaagtcctgaggatcaaaatcat
gatgctgatagattggaacagccagaggatggtgatgcaaagttaatagctatgggcttt
atagccaatgcttccagcaaagttgacattcgtgatgccctgtgctcagagaagctgcaa
ttctcaggttgtatgtcccctcagtttagtggtgtgaatagctttttacatgataaatcc
tcagaaggcatacccttatactcctttagcatggacaggcgagcagtaaaatttcctcca
gcaacgtctgattcttcattgcaaatgaattcccttgcaatcagttcatcatacatgccc
tgggtggatccaggaattaaatcatttagtctggctagttctgttcctgcacctaagctg
gtttcaggttcatttagcattactaatggttctaaaccgttttatagagtggtacatgaa
ccagaaagtagagaaaatgagcaaacatcattctttaatggtaaatatcaagatatggga
ttatatggaacttcaaaaggaagttcttttacagtggaagatgcccctccaacagatcta
actggattgccgttatttgcacggactgcttcaattcctgattcaggttggaaacctcgt
ggggtgttggttgcgcacttgcaggagcaccggtctgccatcaatgacattgcagtttca
agtgatcatagcgtttttgtgagtgcatctgatgattcaactatcaaggtgtgggattca
agaaaattggagaaggacatctcatttagatcaaggttaacttatcacctggaggggagt
cgagcgctatgcactgttatgcttcacaacatagctcaagttgttgttggagcatgtgat
ggcacaattcatatgttttctgttgaacacatgtccagaggccttggtaatgttgttgag
aagtattcagggattgctgatataaaaaagaaggatatcaaggaaggtgccattcttagt
cttttgaactacaccagtgataacagtgatggccagagtgttatgtacagcacccaaaat
tgtgggatccatctctgggatatcagggccaattcaaacgcctggacattaaaagcagtt
cctgaggaaggctacatatcgtctctggttacaggtccttgtggaaactggttcgtctca
ggctcttccaggggtgtgctaacactttgggatctgaggttccttatccctgtaaactca
tggaagtattctcatgtatgccctgtagagaagatgtgcctctttgttcctcctccaaat
gtcactgtaaccagcactgcaagaccactcatatatgttgctgcagggtgtaatgaagtt
tctctttggaatgctgagactgggagctgccaccaggtcatgagggttgcaaattatgac
aatgaagaaatgtctgatataccatgggccttggccaggccatccagtaagacaaatcta
aaactagatatgaggcggaatgtcaaaccaaagtacagagttgaggagcttaatgaacca
cctccgcgttttcctggtattcgtgcgatgcttcccttaccaggtggtgatttgttgact
gggggaactgatttgaagatacgtagatgggaccatttcagccctgaccgaagctattgt
atttctgggccaaatttaaatggagctgggaatgataatccgtatgaaacaaggtcgagt
tttggagtgcaaattgtacaggagacaaaaagacgacatttaacacccaagttgacagcg
aagcaagttcttgcagctgcagctactgattctgctggttgccaccgagattccatcctc
tcattggcttctgtcaagttgaaccagagacttctgatttcaagtagcagagatggggct
atcaaggtttggaagtaa
DBGET
integrated database retrieval system
