Populus alba (white poplar): 118048000
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Entry
118048000 CDS
T07314
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
palz
Populus alba (white poplar)
Pathway
palz03420
Nucleotide excision repair
palz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118048000
09124 Replication and repair
03420 Nucleotide excision repair
118048000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
palz03051
]
118048000
03400 DNA repair and recombination proteins [BR:
palz03400
]
118048000
Proteasome [BR:
palz03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
118048000
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118048000
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Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
Rad60-SLD
UBA_7
Rad60-SLD_2
CUE
Dsc3_N
UBA_RAD5A
Crinkler
Ubiquitin_4
TECR_N
Permuted_GreAB-C
Motif
Other DBs
NCBI-GeneID:
118048000
NCBI-ProteinID:
XP_034913395
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Position
10:complement(13778452..13782583)
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AA seq
392 aa
AA seq
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MKIFVKTLKGSTFDIEVKPGDTVADVKKNIETAQGASVYPAEQQMLIYQGKVLKDDTTLG
ENKVAENSFVVIMLSKAKSSSGEGSTTSAAPTPKAPTTSAPVSTAPPASTVTSALPTSVP
SPAPAPAPAPAPAPAPASSVIAESESDVYGQAASNLVAGNNLEGAVQQILDMGGGSWDRD
TVVRALRAAYNNPERAVEYLYTGIPEQAEAPPAAQVPVSEQAPATQPRQQPAQPTTAPAG
GPNANPLDLFPQGLPNIGSGAAEAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQ
NPHLMRLIQEHQDDFLRLINEPVEGGEGNVSGPLAAAMPQSVTVTPEEREAIERLGAMGF
DPALVLEVYFACNKNEELAANYLLDHIHEFED
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttgttaagactttgaaaggcagcacttttgacatcgaagttaaacctgga
gacacggttgctgatgtaaaaaagaacatagaaacagctcaaggggcatctgtttatccc
gctgaacagcaaatgcttatctatcaggggaaagttcttaaagatgacaccacgttaggt
gaaaataaagttgctgaaaatagttttgttgttatcatgttatcgaaggctaagagctca
tctggtgagggctcaactacatcagctgctcctacccctaaggcacccacaacaagtgcc
ccggtctcaacagcacctccagcttccacagtgacttctgcattgccaacatctgtacct
tcccctgctccagctccggctccggctccggctccagctccagctccggcttcttcagtt
attgctgaatcagagtctgatgtatatggccaagcagcatctaatcttgttgcgggaaat
aacttggagggagcagtccagcaaatccttgatatgggtggaggttcttgggatagagat
actgttgttcgtgctcttcgtgctgcttacaataatccagagagagccgttgaatattta
tacactggtatcccagaacaagcagaagccccacctgcggctcaagtccctgtaagcgag
caagctcctgcaacccagcctcggcagcagccagcacaaccaactacagctcctgctggt
ggaccaaatgcaaatcctttagatctcttcccccagggccttcccaacattggttcaggg
gctgctgaagcaggaactcttgattttttgaggaacagtcaacagttccaagccttgcga
gctatggtgcaggctaacccacagatactgcagcctatgctccaagaactgggaaaacaa
aatcctcatttaatgaggctcattcaagagcaccaggatgactttctccgcctgatcaat
gaacctgttgaaggtggagaggggaacgtatcggggccgcttgctgcagcaatgccgcaa
tcagtaacagtcacacctgaggagcgcgaagcaatagaacgtcttggagctatgggtttt
gatcctgcacttgttttggaggtgtattttgcctgcaacaagaatgaggagctggcagcc
aactacctcttagatcacatacatgagtttgaggattga
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