KEGG   Populus alba (white poplar): 118048000
Entry
118048000         CDS       T07314                                 
Name
(RefSeq) ubiquitin receptor RAD23d
  KO
K10839  UV excision repair protein RAD23
Organism
palz  Populus alba (white poplar)
Pathway
palz03420  Nucleotide excision repair
palz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118048000
  09124 Replication and repair
   03420 Nucleotide excision repair
    118048000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:palz03051]
    118048000
   03400 DNA repair and recombination proteins [BR:palz03400]
    118048000
Proteasome [BR:palz03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    118048000
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      118048000
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD UBA_7 Rad60-SLD_2 CUE Dsc3_N UBA_RAD5A Crinkler Ubiquitin_4 TECR_N Permuted_GreAB-C
Other DBs
NCBI-GeneID: 118048000
NCBI-ProteinID: XP_034913395
LinkDB
Position
10:complement(13778452..13782583)
AA seq 392 aa
MKIFVKTLKGSTFDIEVKPGDTVADVKKNIETAQGASVYPAEQQMLIYQGKVLKDDTTLG
ENKVAENSFVVIMLSKAKSSSGEGSTTSAAPTPKAPTTSAPVSTAPPASTVTSALPTSVP
SPAPAPAPAPAPAPAPASSVIAESESDVYGQAASNLVAGNNLEGAVQQILDMGGGSWDRD
TVVRALRAAYNNPERAVEYLYTGIPEQAEAPPAAQVPVSEQAPATQPRQQPAQPTTAPAG
GPNANPLDLFPQGLPNIGSGAAEAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQ
NPHLMRLIQEHQDDFLRLINEPVEGGEGNVSGPLAAAMPQSVTVTPEEREAIERLGAMGF
DPALVLEVYFACNKNEELAANYLLDHIHEFED
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaagatttttgttaagactttgaaaggcagcacttttgacatcgaagttaaacctgga
gacacggttgctgatgtaaaaaagaacatagaaacagctcaaggggcatctgtttatccc
gctgaacagcaaatgcttatctatcaggggaaagttcttaaagatgacaccacgttaggt
gaaaataaagttgctgaaaatagttttgttgttatcatgttatcgaaggctaagagctca
tctggtgagggctcaactacatcagctgctcctacccctaaggcacccacaacaagtgcc
ccggtctcaacagcacctccagcttccacagtgacttctgcattgccaacatctgtacct
tcccctgctccagctccggctccggctccggctccagctccagctccggcttcttcagtt
attgctgaatcagagtctgatgtatatggccaagcagcatctaatcttgttgcgggaaat
aacttggagggagcagtccagcaaatccttgatatgggtggaggttcttgggatagagat
actgttgttcgtgctcttcgtgctgcttacaataatccagagagagccgttgaatattta
tacactggtatcccagaacaagcagaagccccacctgcggctcaagtccctgtaagcgag
caagctcctgcaacccagcctcggcagcagccagcacaaccaactacagctcctgctggt
ggaccaaatgcaaatcctttagatctcttcccccagggccttcccaacattggttcaggg
gctgctgaagcaggaactcttgattttttgaggaacagtcaacagttccaagccttgcga
gctatggtgcaggctaacccacagatactgcagcctatgctccaagaactgggaaaacaa
aatcctcatttaatgaggctcattcaagagcaccaggatgactttctccgcctgatcaat
gaacctgttgaaggtggagaggggaacgtatcggggccgcttgctgcagcaatgccgcaa
tcagtaacagtcacacctgaggagcgcgaagcaatagaacgtcttggagctatgggtttt
gatcctgcacttgttttggaggtgtattttgcctgcaacaagaatgaggagctggcagcc
aactacctcttagatcacatacatgagtttgaggattga

DBGET integrated database retrieval system