KEGG   Populus alba (white poplar): 118048013
Entry
118048013         CDS       T07314                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A isoform X1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
palz  Populus alba (white poplar)
Pathway
palz03020  RNA polymerase
palz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118048013
  09124 Replication and repair
   03420 Nucleotide excision repair
    118048013
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:palz03021]
    118048013
   03400 DNA repair and recombination proteins [BR:palz03400]
    118048013
Transcription machinery [BR:palz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     118048013
  RNA polymerase III system
   RNA polymerase III
     118048013
  RNA polymerase I system
   RNA polymerase I
     118048013
DNA repair and recombination proteins [BR:palz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118048013
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 118048013
NCBI-ProteinID: XP_034913404
LinkDB
Position
6:complement(14475425..14478603)
AA seq 206 aa
MTLTEEEIKRLFRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK
RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK
FHLEVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYG
LKRGQVVKIIRPSETAGRYVTYRYVI
NT seq 621 nt   +upstreamnt  +downstreamnt
atgactttaacagaagaagaaatcaagaggctgtttagaattagaaagacagtgatgcaa
atgctcaaggatagaggttattttgttggagactttgaaattaaaatgacaagagagcaa
tttgaatccaaatatggtaataacatgaaaagggaagatcttgttattaacaagaccaag
cgaaacgatagttctgatcagatttatgttttctttccggaggaagctaaagttggtgtt
aaaacaatgaagacatacactaatcgcatgaaatccgagaatgtttttagagcaatcttg
gttgttcaacagaatttgaccccatttgctcgaacttgtatcaatgagatctctacaaaa
ttccacttggaggtctttcaggaggctgagctgttggttaacatcaaagagcatgttctt
gtccctgaacatcaagttctttcaaatgaagagaagaagactttgttggagagatataca
gtgaaagaaacacagctgcctcgcattcagataactgatccaatcgcaagatactacggg
ctgaagcgtggacaagttgttaagattatcaggccaagtgaaacagcaggacgatatgtt
acctaccgatatgttatataa

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