Populus alba (white poplar): 118048017
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Entry
118048017 CDS
T07314
Name
(RefSeq) zinc finger CCCH domain-containing protein 64 isoform X1
KO
K24939
CWF19-like protein 1
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118048017
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118048017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH_DUS3L
zf-CCCH
zf-CCCH_4
Torus
zf_CCCH_4
zf-CCCH_PARP12
zf-CCCH_3
zf-CCCH_12
zf-CCCH_RBM22
zf-CCCH_2
zf-CCCH_10
Motif
Other DBs
NCBI-GeneID:
118048017
NCBI-ProteinID:
XP_034913408
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All DBs
Position
6:complement(13456527..13460778)
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AA seq
614 aa
AA seq
DB search
MSPPRILLCGDVLGRLNQLFKRVQSVNKSAGPFDALFCVGQFFPDSAEQLEEFTDYIEGG
GGRSQIPLPTYFIGDYGVAAPKVLSTASRNSANLGFKMDGFKICDNLFWLRGSGKFSFHG
LSVVYLSGRQSSNGHHFGTYSQDDVDALRALAEEPGVVDLFLTNEWPSGVTNRASASDIP
AGFLDTTGSDSSVSELVAEIKPRYHFAGTKGVFYAREPYSNVDAVHVTRFFGLAMVGNKD
KQKFIHAISPTPASTMSAAEISMKPPNTTLSPYTLVVDKTALEEVTKRSTASVSDSQYWR
YDVSHKRHKSGSGEGNKLCFKFIYSGSCPRGEKCNFQHDMDAREQYLGGVCLDFLIKGKC
ERGPDCNFKHNLQNEGESHSRRRRGSENDNGNRSKECWFCLSSPNVESHLIISVGEFYYC
ALPKGPLVQDHVLVIPIEHAPCTLSLTQQSNSELVKFQNSLKLYYKNRGKEAVLFEWISK
RSSHANIQVVPVPSTKAAAVQDICNLAAEKLGFKFVVMKFILAVNNSSDGREWLKTQFDR
NFSFFYVELTEGTILSHLVEENENFPAQFGREVLAGLLNMPERADWRNCALGKDEETKMA
EEFKKQFEEMDPNQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgagaattcttctttgcggtgacgttttaggccggctcaaccagctcttc
aagcgtgtccaatcggtgaacaaatcggcgggccctttcgatgcactcttttgcgtgggg
cagttctttcctgactccgctgagcaattggaggaattcacggactacattgaaggcggc
ggcggccgctctcaaattcctctccccacctactttatcggcgactacggtgtcgccgct
cccaaagtcctctccactgcttccagaaactccgccaatttaggcttcaaaatggacggc
tttaaaatttgtgataaccttttctggcttagaggcagcggcaagttcagtttccacggt
ttatctgttgtgtacttatccggtaggcagtcatcaaatggccaccactttggaacatac
agtcaagatgatgttgatgcgttgcgagcattggccgaggaacctggagttgttgacttg
tttttaactaatgaatggcccagtggcgtcacaaacagagcttctgcatctgatattcct
gcaggattcttggatactacaggttctgattcttccgtatctgaattagtagcagagatc
aaaccacgctaccactttgcaggtactaagggtgttttctatgctcgtgaaccttactct
aatgttgatgctgtgcatgtcacacgtttctttggtcttgctatggttggaaacaaggat
aagcagaaatttatccacgccatttctcccactccagcatctacaatgtctgctgccgag
attagcatgaaacctccaaatactaccttatctccatacacattagtagtagataaaaca
gctctcgaagaagtcacaaagaggtctactgctagtgtgtcagattcacaatattggagg
tacgatgtctcccataaacgacataaatctggatctggggaaggcaataagctgtgcttt
aaatttatatattccggttcatgtccacgaggagaaaagtgtaacttccaacatgacatg
gatgcaagggaacaatacttaggaggtgtttgtcttgatttccttatcaaaggaaaatgt
gaaagaggtccagactgcaactttaagcacaacttgcagaatgaaggtgagagccattct
cgtaggagacgcggctctgaaaatgataatggtaacaggtcaaaagagtgttggttttgt
ttgtcaagccccaacgtggaatcacatctaatcattagcgtaggagaattttactattgt
gcactgcctaaaggtccccttgttcaagatcatgttctggtaatacccattgagcatgca
ccgtgtaccctttcactaactcaacaaagtaattctgagctggtaaaattccagaacagt
ctcaagttatattacaagaaccgaggaaaggaagctgttttatttgagtggatttccaaa
cggagtagtcatgctaatattcaggttgtccctgttccatcaaccaaagcagcagcagtt
caagatatatgtaacttggctgcagaaaagttgggtttcaaatttgtggtcatgaagttt
atccttgcagtcaataacagttcagatgggagagaatggttaaagacgcagttcgatagg
aactttagtttcttctatgtggaactcacagaaggcacaatactgtcacatttagttgag
gagaatgagaattttccagcccaatttggacgcgaagttctagcaggcttgctgaacatg
ccggagagggctgattggagaaattgtgcacttggcaaagatgaggagacgaaaatggca
gaagaattcaagaaacaatttgaagaaatggatccaaatcaatga
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