Populus alba (white poplar): 118048019
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Entry
118048019 CDS
T07314
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
palz
Populus alba (white poplar)
Pathway
palz03082
ATP-dependent chromatin remodeling
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118048019
03083 Polycomb repressive complex
118048019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118048019
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
118048019
Histone modification proteins
HAT complexes
HATB complex
118048019
HDAC complexes
Sin3A-HDAC complex
118048019
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
118048019
PRC2.2
118048019
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
118048019
Heterochromatin formation proteins
Other heterochromatin formation proteins
118048019
Chromatin remodeling factors
NuRD complex
118048019
NuRF complex
118048019
NuRF complex (fruit fly)
118048019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
Beta-prop_IFT122_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_1st
DUF3798
Motif
Other DBs
NCBI-GeneID:
118048019
NCBI-ProteinID:
XP_034913412
LinkDB
All DBs
Position
6:complement(13410361..13417672)
Genome browser
AA seq
498 aa
AA seq
DB search
MEAAAAAPQVPKKRGRKPKPKEDQQQQQQSAGPRMKEGKKAHQHSVDDKYTQWKSLVPVL
YDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKSRVA
AAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQP
NRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHITSSAT
DPATKSPGSGGSIIKKAGDGNDKATDGPSVGPRGIYQGHEDTVEDVAFCPSSAQEFCSVG
DDSCLILWDARDGTNPAIKVEKAHNADLHCVDWNPHDDNLILTGSADTSVCMFDRRNLTS
NGVGSPVYKFEGHNAAVLCVQWSPDKASVFGSSAEDGLLNIWDYEKVGKRSERLTRALNS
PAGLFFQHAGHRDKVVDFHWNASDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEV
LAELEKFKSHVVSCASKP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgctgctgctgctcctcaggtgccaaagaagagaggccgaaaacccaagccc
aaagaagatcagcaacagcaacagcaaagtgctggtcccagaatgaaagagggaaagaag
gcacaccaacactctgttgatgacaagtacactcagtggaagtctttggttcctgttctc
tatgactggcttgctaatcacaaccttgtttggccttctctctcttgccggtggggtccg
cagcttgagcaagctacttacaagaatcgccagcgcctctatctttccgagcagactgat
ggtagtgttccaaatactctggtcattgcaaattgtgaagttgtcaagtctagggttgct
gctgcggaacacatttctcagtttaatgaagaagcacgctctccatttgttaagaagtac
aagaccatcatacaccctggagaggtaaatagaatcagagaactcccacagaatagtaag
atagtggccactcatactgacagccctgatgttcttatatgggatgttgaagcacagcct
aaccgccatgctgttcttggagctacaaactctcgtccagatttgattttgaccggacat
caagacaatgctgaatttgctcttgcaatgtgcccaactgaaccctatgtgctttctgga
gggaaggacaagtcagtagttttgtggagtatccaggaccatataacatcatctgccact
gacccagcaacaaagtctccaggatctggtggatcgatcattaaaaaggctggggatggc
aatgataaagccactgatggcccttctgttggaccacgaggtatatatcaggggcatgag
gatacagttgaagatgtggcattctgtccatccagtgcgcaggagttttgtagtgtagga
gatgactcttgccttatattatgggatgctcgagatggcactaacccagctatcaaggtt
gaaaaggcacataatgctgatcttcactgtgttgattggaatcctcatgatgataacctc
attttaactgggtcagcagatacttctgtttgcatgtttgatcgacggaacctcacttct
aatggagttggttcacctgtctataaatttgagggtcacaatgctgctgttctctgtgta
cagtggtctccagataaggcttctgtgtttgggagttctgcggaggatggtctcttaaac
atttgggattatgagaaggttggcaaaaggtctgagcgtctgactagagccctgaattct
cctgcaggattgtttttccagcatgctgggcacagggacaaggttgttgacttccattgg
aatgcatctgatccttggacagtggttagtgtgtctgatgactgtgatacaactggggga
ggagggacattgcagatatggcgcatgagtgatttgatctacaggccagaagatgaggtt
ttggcagagcttgagaagttcaagtcacatgtggtttcctgtgcttcgaagccttga
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