Populus alba (white poplar): 118048075
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Entry
118048075 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K15082
DNA repair protein RAD7
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118048075
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
118048075
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_Zer-1
LRR_NXF1-5
LRR_4
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
118048075
NCBI-ProteinID:
XP_034913502
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Position
6:complement(12305564..12314080)
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AA seq
870 aa
AA seq
DB search
MAVLRSRGILPTTPANKKGPTPEPVTPTRTREPSTHQSPPTPNPPGVSLLGSDSAPPRRR
SLRLASKSLPSAEASLQTPTRKRKKGSDGKQGRLVNEGDVVEKMTERDVGGEVLRVLSLR
SGKKVVDNRKIEIEGEEVKGSSVLRTKGKGKGRGDLGKKVLKLDVQEKSVEILNDNAVER
SENSEKLGDSSRGKRKCTGEVKMERGEEGGIAVEDLGKSPSANESGTSTRGRRKYDREVK
VEGVKECVVEGMKENPCTDENGTSRRGRRYSREEKEKRSKEGAVVIEELGENPVSLEGGS
SRGRMRYSREEKGKGKLVVDDGLISNGKDMLQLEPRVKNLVDGLAESVVLEERKEGASAR
SKVPESRMEQFRDIARQNASRFAHFEVQEHEADHHDVEMPSVEEEHDKVEDWPGPFSTAM
KIIRDRANRLNLQQRGSISEKEKHVPITWMPKTDRACKPSKGLVPSLQELCMKILVKNAD
AIASLEHVPDALRHRLCQLLCDSRRMNAHFLALLVRGSPMEIRIRDCSWLAEEEFTKIFE
VCDSHNLTVLQLDQCGRCMADYTLLATLARSPGSLPRLTTLSISGACRLSDAALSSLVSS
APALQSLNLSQCSLLTSASIDTLADSLATSLRELYINDCQSIQPMLILPALKKLEHLEVL
SLSGIQTINDNFLRGFIVARGHNIKELVLTDCVKLTDSSMKVIAETCSKLCALDLGNLRK
LTDSALGFLANACREIHTLKLCRNAFSDEAIAAFLEASGEPLKELSLNNVKKVGHCTALS
LARRSRKLLSLDLSWCRNLTNEALGLIVDSCLSLKVLKLFGCSQVTNVFLDGHSNSDVQI
IGLKTSPVLEHIRVPELQEFALRYSSVSSI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctcaggtcccgcggaatactcccaactacacctgcaaacaaaaaagggccc
acacccgaacctgtcactccaactcgaactcgcgaaccttccactcaccaatcccctccc
acccccaacccccccggtgtttctcttttgggctccgactctgcccctccacgcaggcgg
agcctccgtctcgcttcgaagtcacttccttctgccgaagcctcccttcaaactccaacc
cgcaagaggaagaaggggagtgatggtaaacaaggtcggcttgttaatgaaggtgatgtg
gttgagaaaatgaccgaacgagatgttggaggtgaagtattgagggttttaagtttgagg
tctgggaaaaaggttgttgataatcgtaaaattgaaattgaaggtgaagaagtcaagggt
tcgagtgttctgcgtacaaaagggaagggaaagggaaggggggatttgggtaagaaagtg
ttaaagttggatgttcaagagaagtctgtggaaattttgaatgataacgcggtcgagaga
agtgaaaattcggagaagttgggtgattcgtcaaggggaaagaggaaatgtacaggagaa
gtaaaaatggagagaggtgaagagggtggtattgctgtggaggacctggggaaaagccct
agtgctaatgagagtgggacttcaacaagaggaaggagaaaatatgacagagaagtgaaa
gtggagggagttaaagagtgtgttgtcgagggaatgaaggaaaatccatgtacagatgag
aatggcacttcaaggagagggaggaggtatagtagagaggaaaaagagaagagaagtaaa
gagggtgctgttgttattgaggaattaggggaaaatccagtttctcttgagggtggaagt
tcaaggggaaggatgaggtatagcagagaagagaaagggaaggggaaattggttgttgat
gatggtttgatatcaaatggaaaggatatgttgcaattagaacccagagttaagaatctg
gttgatggtttggcagagagtgtggttctggaagagagaaaggagggtgcgagtgcaaga
agtaaagtgcctgaatcaagaatggagcaatttcgtgatatagcaaggcagaatgcttct
cgatttgcacattttgaagttcaggagcatgaggcagaccatcatgacgtagaaatgcca
tctgtggaagaagagcatgacaaagttgaagactggcctggtcctttctctactgctatg
aagattatcagggatagagcaaataggcttaacttgcaacagaggggctccatttcagag
aaggaaaaacatgtgccaataacttggatgccaaaaactgatcgggcgtgtaagccttca
aaaggattggttccttcactgcaagaattatgcatgaaaattctagtgaagaatgccgat
gcaattgcttcacttgaacatgtcccagatgctttgaggcataggctatgccaattgctc
tgtgattctcggagaatgaatgctcattttttggctcttcttgtccgcggatcacctatg
gagatacgtataagggattgttcgtggctagcagaggaagagttcacaaaaatttttgag
gtgtgcgactcgcacaacttaacggttctacaactcgaccaatgtggacgctgcatggca
gattatactttacttgctactttagctcggtcaccaggtagcttgcctaggttaactact
ttatccatcagtggagcatgccgactctcagatgctgcacttagttcacttgtttcttct
gctcctgccctacaatctttaaatctcagccagtgctcccttcttacctctgccagtatt
gatactttagctgattcgttggcaacaagtttgcgggaactgtacattaatgattgccaa
agcattcaacccatgctcattttgccagcactgaagaaactagaacatttagaagtgttg
tccctgtctggaattcaaaccattaatgataattttttgaggggatttattgttgcacgt
ggccataatataaaggagcttgttttgactgattgtgtgaaattgactgattcttccatg
aaagtcatagctgaaacctgctctaaattatgtgcacttgatcttggtaacttgaggaaa
ctgacagattctgctttgggatttcttgcaaatgcttgcagagaaatccatactttgaaa
ctctgccgcaatgccttcagtgatgaagctattgctgcatttttggaagcttctggagag
cctttaaaagaactttcattgaataatgttaagaaggttggccactgtacagcattatct
cttgctagacgttcaagaaagttgctgagtttggatttgtcatggtgtcggaacttgaca
aatgaggccttgggcttgattgtggatagttgtttatcattgaaggtgcttaaacttttt
ggatgcagtcaggttacaaatgttttcttagatggtcactcaaattcagatgtacaaatt
attggcttgaagacgtctcctgtactggaacatatcagggttcctgaactgcaagaattt
gcattgcgttattcctcagtgtcttctatctga
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