Populus alba (white poplar): 118048355
Help
Entry
118048355 CDS
T07314
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118048355
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118048355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
118048355
NCBI-ProteinID:
XP_034913883
LinkDB
All DBs
Position
6:10228606..10232365
Genome browser
AA seq
486 aa
AA seq
DB search
MLTRSCIVLTLILSSFSPLGSAMLNRTLLTPHPNPEEVVQEVQRRVNASVSRRQTLQVLS
QEDQSTCLTGNPIDDCWKCDPDWPNNRQRLADCAIGFGQYAMGGKNGEYYIVTDSSDDDA
VNPRPGTLRYAVIQPQPLWIVFPTNMLIKLSQELIFNSYKTLDGRGANVHISGGGCITLQ
YISNVIIHNIHIHHCVQSGDTNVRSSPTHFGYRTKSDGDGISIFGSKDIWIDHCSLSHCK
DGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDDYSPDSGMQVTIAFNHFGEKLVQRMPR
CRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPSNRNAKEVTKRVDTAEDDWRG
WNWRSEGDILVNGAFFVASGAELEVKYEKAYSVEPKSAVLIDLLTMHSGVLGVGGRNNNL
GMWSTGSDGGKEGLGSGEGDDYLDDYSGSSISLPPPSPYALLPILTALIYLLSFQYIIAA
ALTSML
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcttacaagaagctgcattgtcctaactctgattcttagctcattttctccacttggg
tcggcaatgcttaaccgcacccttctcaccccacaccccaaccctgaagaagttgttcaa
gaagttcagagaagagtaaatgcttccgtgtcaagaaggcaaacgctacaagtactatct
caagaagatcaatccacatgcctaacaggtaaccccattgatgattgctggaagtgtgac
ccagactggcccaacaatcgccagaggctggcggattgcgctattgggttcgggcagtac
gccatgggtggcaagaacggtgaatactacatagtgactgactcctcggatgacgacgcc
gtcaatccaaggccgggcactctcagatatgctgtgatacaacctcagcccctttggatt
gtgtttcccactaacatgctcattaaattgtcccaagaactcatttttaatagctataaa
acccttgatgggcgtggggctaatgttcacatttcgggtggtggctgcattactctgcag
tatatcagcaatgttattattcacaacatacacattcaccattgtgttcagtcaggtgat
accaatgtgcgttcaagcccgacccactttgggtaccggaccaagtccgatggtgatggc
atttccatcttcggctccaaagacatatggattgatcactgctcactttctcactgtaag
gacggtctgattgatgctgtgatggggtccacagggatcacaatatcaaacaactttttc
tcccatcacaatgaggttatgctgctaggtcacagtgatgattactcgcctgactccggg
atgcaggtgaccatagccttcaaccactttggagagaagttggtgcagagaatgcctaga
tgtagaagagggtatattcatgtggtgaataatgattttacacagtgggaaatgtacgct
attggtggtagtggtaaccctaccattaacagccaagggaatcgctacacagctccttcc
aatcgcaatgctaaagaggttacaaagcgggtggacacggcggaagatgattggagaggt
tggaattggagatcggagggagacatattggttaacggagcattttttgtggcctcaggt
gcggaactagaggtgaagtatgagaaggcctacagtgtggagcccaagtcagctgttctc
attgacctcctcaccatgcattctggcgtcctcggtgttggtggcaggaacaacaatctg
ggaatgtggagcacagggtcagatggcggcaaagagggattaggatccggcgaaggcgat
gactatttggatgactactccggtagcagtatttcgttgccgcctccctctccatatgct
cttcttcctattttgactgcactgatctacttgttatctttccagtacattatagcagca
gcactgacatccatgttgtag
DBGET
integrated database retrieval system
