Populus alba (white poplar): 118048374
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Entry
118048374 CDS
T07314
Name
(RefSeq) nuclear pore complex protein NUP205
KO
K14310
nuclear pore complex protein Nup205
Organism
palz
Populus alba (white poplar)
Pathway
palz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118048374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118048374
03036 Chromosome and associated proteins [BR:
palz03036
]
118048374
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118048374
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118048374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
RNAseD_HRDC_C
Motif
Other DBs
NCBI-GeneID:
118048374
NCBI-ProteinID:
XP_034913916
LinkDB
All DBs
Position
6:9970274..10003732
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AA seq
1883 aa
AA seq
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MASPKQLLSTIESTLLNSSPPSAAERVELMHAIRRSLPSLQALLFYPPPKPSDRAQVVQS
KEVRLPDSPAISLDDQDVQIALKLSDDLHLNEIECVRLLVSANQEWGLMAREPLEILRLA
AGLWYTERRDLITALHMLLRAVVLDRGLEDDIISDIQKYLEDLINGGLRQRLISLIKELN
LEEPAGFGGPLCEHYVLDSRGALVERQAVVCRERLILGHCLVLSVLVVRTSPKDVKDIFN
CLKDSAAEPMEGTNTLKHQITFSLLFSLVIAFISDALSAVPDKGSILSHDASFRKEFHEI
VMAAGNNPNVEGFVGVVRLAWCVHLMLINDAVSASSSNNSGYVNSCLEFIFSHNVFQFLL
DNILRTAAYQNDDEDMIYMYNAYMHKLTTCLLSHQLVRDKVKESKDKAMSTLNSYRLAVS
QDLMHDSNPDSQQATETGHLLFVSLLEFVSEIYKKEPELLSGNDVLWTFVNFAGEDHTNF
QTLVAFLKMLSALASSQEGAAKVYELLQGNAFRSVGWSTLFDCLTIYDEKFKQSVQTTGT
MLPEFQEGDAKALVAYLDVLQKVIENGNPVDRKNWFPDIEPLFKVLSYENVPPYLKGALR
NAIATFVHVSPVLKDAIWSYLEQYDLPVVVGAQVGNIAQPTGTQVYDMQYELNEIEARRE
QYPSTISFLNLLNTLIGEEKDVSDRGRRFIGIFRFICDHVFGPFPQRAYADPCEKWQLVV
SCLQHFHMMLSMYEIEDEDIDSVVDLSQLSTVTQPSSLQMQLPVLELLKDFMSGRIVFRN
IMGILLPGVNSIITERTSQIYGQLLEKAVQLSLEIIILVLEKDLLVSDYWRPLYQPLDVI
LSQDHNLIVALLEYVRYDFLPKIQQCSIKIMSILSSRVVGLVQLLLKSNAANSLVEDYAA
CLEVRSEECQIIENKVDDPGVLIMQLLIDNISRPAPNVTHLLLKFDIDHAVEQTVLQPKF
HYSCLKVILEILDRLLKPEKNAMLHEFGFQLLYELSVDPLTCGPTMDLLSKKKYQFFVKH
LDTIGIAPLPKRNSNQPLRISSLHQRAWLLKLLAVELHSGYMGGPSHREACQTILAHLFG
RDVIESGSDHVVYDSVILRNGTEHAGTQTISKNKVLELLEVIQFRSPDTTMKLSQIVSNM
KYDLMAEDILGDPRTSGRGGIYYYSERGDRLIDLASFRDKLWQKFNSVYPQLSNFGNEAE
LNDVRETIQQLLRWGWKYNKNLEEQAAQLHMLTGWSHIVEVSASRRIHSLENRSEILYRV
LDASLSASASQDCSLRMAFVLSQVALTCMAKLRDERFLCSGGLNSDNMTCLDVITAKKLS
NGACHSILFKLIMAILRNESSEALRRRQYALLLGYFQYCQHMLDPNIPTSVMQFLMLEEQ
DSEDLDFQKIDKDQAELARTNFSIMRKESQAILDLVISDATKGSEPGKTIALYVLVALIC
VDHERYFLSQLQSRGFLRTCLTSISNFSNQDGGHSLDSLQRASTLEAELALLLRISYKYG
KSGAQVLFSMGALEHLASCRAVSLQGCLRRFDRKLRRDVSVDFDKQCMIVTPMLRLLFSL
TSLVDTSDIFEVKNKIVREVIDFVKGHQLLFDQILREDISTADELTVEQINLVVGILCKV
WPYEESDEFGFVQGLFGMMRALFSCDSGAPTVGKLAQSSENKSKVELNSFRLCFSLGSYL
YFLVTKMSLRLQVSDSSIDYHSPAMLQQPTLMLLDSLLRSVATSLEMAADEKSLLLNKIQ
DINELSRQEVDEIINMCAMQESVSSSDDIQKRRYIAMMEMSRVAGERDQLITLLLPLAEH
VLDIILVHFREGSMASDNSGVTKAVTFGTHSDPRQDLSWMCGMLVPTLERLELLSEDKVG
HNLKVFRRLVTSLKEMAIQNLAL
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccaaaacaactcctctccaccatcgaatccacacttctaaattcttcgcca
ccgtcagcggcggagagagtcgaactaatgcacgctattcgcaggtctctcccgtctctg
caagcgctcctcttctacccgcctcccaaaccatcggaccgcgcacaagtcgtccagtcg
aaagaagttaggctgccggattcaccagcaatctcactagatgatcaggatgtgcaaatt
gcattgaaattgagtgatgacctccatcttaacgaaatagagtgtgttcgattgctggtt
tctgccaatcaagagtggggtttaatggcgcgggagccattagaaatcctgcggcttgca
gcaggactttggtacaccgagagacgagatctaataacagccctgcatatgctattaagg
gctgtagtgcttgatcgaggacttgaagatgatatcatctcagacatccagaagtatctt
gaagatctaatcaatggtgggcttcgacagcgattgatttctctaataaaggaactcaat
ctggaagaaccagctggttttggtgggcctctttgtgagcattatgtccttgattctaga
ggtgctcttgttgagcgtcaagctgtggtttgtagagagagattgatactcggacattgc
cttgtcctctctgttctggttgtccggacaagtccaaaagatgtaaaggatatttttaat
tgtttaaaagatagcgcagctgaacctatggagggcaccaacacattaaaacatcagatt
acattcagtctgcttttctctcttgtaattgctttcatatcagatgctctgagtgccgtt
cctgataaaggatctatcctgtctcatgatgcttcttttagaaaagaatttcatgaaatt
gtgatggccgctggaaacaatccaaacgtggagggctttgttggtgttgtaagacttgct
tggtgtgtgcatttgatgttaataaatgatgcggtttcagcttcttcatcaaataattca
ggctatgtaaattcgtgcctggaattcattttctcacacaatgtttttcagtttttactg
gataacattcttcgaacagcagcctaccagaatgatgacgaggatatgatctacatgtac
aatgcttatatgcacaagctgactacttgcttactctctcaccaacttgtgagggataag
gtaaaagaatctaaggacaaggcaatgagcacgctcaactcataccgtttggctgtttca
caagatcttatgcatgatagcaacccggattcacaacaggccaccgaaactggtcatctg
ctgtttgtttctctgctggagtttgtgagcgaaatttataagaaagaaccagagctattg
tctggcaatgatgttttgtggacatttgtcaatttcgctggagaggatcatactaatttt
caaacactcgtagcctttttaaaaatgctgagtgctctggcttcaagtcaagaaggtgct
gcaaaggtttatgagttacttcagggaaacgccttccgttctgttgggtggagcactttg
tttgattgcttaactatatatgacgagaagttcaaacagtcagttcagactactggaacc
atgctaccagaatttcaggaaggggatgcaaaagcactggttgcatatctggatgttctt
caaaaggttattgaaaatgggaatcctgtggatagaaaaaactggtttcctgacattgaa
ccattgttcaaggtccttagttatgaaaatgtgcctccatatttgaagggtgctctgcgg
aatgctatagctacttttgttcatgtctctccagtcctaaaagatgctatttggagttat
cttgagcagtatgatttacctgtggttgttggggctcaggttggaaacattgcacagccg
acaggaacacaggtttatgatatgcaatatgagttgaatgaaatagaagcaaggagagaa
caatatccttcaacaatatctttccttaacttgttaaatactctcattggtgaggaaaaa
gatgtgagtgatagagggcgtagatttataggtatctttaggttcatatgtgatcatgtc
tttgggccattccctcagagagcctatgcagatccttgtgagaaatggcaattagttgtt
tcttgtcttcaacattttcacatgatgttgagcatgtatgaaattgaagatgaggacatt
gacagtgttgttgacctgtcacagctttcaacagtcacacaaccatcttcgcttcagatg
cagcttccggtcttagagttgttaaaagatttcatgagtggccggattgtttttcgaaat
atcatgggcatccttctgccaggggtaaattctataatcactgaacggacttctcaaatt
tatgggcaactgcttgaaaaggctgtacaactttctttggagattattatccttgtcctt
gaaaaggatttactagtttctgattattggcgtcctctataccagcctttggatgttatt
ctttcacaagatcataatctaattgtggcattgctggagtatgtcagatatgattttcta
cccaaaattcagcaatgctcaatcaaaatcatgagtattctaagttcccgtgtggtgggt
ctcgtacaattactgttgaaatccaatgctgcaaactctttggttgaggattatgcagcc
tgccttgaggtacgatcagaagaatgtcagattatagagaacaaggttgatgatccaggg
gttctgataatgcagctcctaatagataacattagtcggccagctccaaatgttacacat
ttactgcttaaatttgatattgaccacgcagttgagcagacagttctgcaaccaaagttt
cactacagttgcttgaaggttattcttgaaatcctggacagacttttaaaacctgaaaag
aatgcaatgcttcatgagtttggttttcagctcctttatgagttgtccgtggacccgctt
acatgtggccctaccatggatttgctgagcaagaaaaagtatcaattctttgtaaagcac
cttgatactatcggtattgctccgcttcctaaacggaatagcaatcagccacttcgcatc
agctcccttcaccagagagcatggctcttgaagcttttagctgtagaattgcactctggt
tatatgggtggcccctctcatcgagaagcatgtcagaccatacttgctcatctttttgga
cgggatgtaattgaaagcgggtctgatcatgtagtttatgattccgttatacttcgaaat
ggtactgagcatgctgggacccagacaataagcaagaataaggttttggagttgctcgag
gttatccaatttcgatctcctgatactaccatgaagctttctcagattgtttccaatatg
aagtatgacttgatggcagaggacatacttggagatccaagaacttcaggaaggggcggt
atctactactattcagagcgcggtgatcgtttgattgaccttgcttctttccgtgataag
ctttggcagaaattcaattcagtctatccccagttaagtaactttggaaatgaagctgaa
ctcaatgatgtaagagagacaattcaacagttattgagatgggggtggaagtataataag
aaccttgaggaacaagctgcccaacttcatatgttaactggctggtcacatattgttgag
gtgtctgcatctagaagaatacattcacttgaaaatcgatctgaaattttatatcgggtt
cttgatgcctctctaagtgcttctgcttctcaagactgttcattgaggatggcatttgta
ttgagtcaggttgccctaacatgcatggctaaactgcgtgatgaaaggttcttgtgctct
ggtggtttaaattcagataatatgacatgtcttgatgttataacagcaaagaaactatca
aatggtgcctgtcactcaatattatttaagcttataatggcaattttgagaaatgaatca
tcagaagctctgagaagacgtcaatatgcattgctacttggctattttcagtattgtcag
catatgcttgatccaaatatcccaacatcagttatgcaatttctgatgctcgaggagcaa
gatagtgaagatctagatttccagaaaattgacaaagatcaggcagaactagctcgtacc
aatttttcaattatgaggaaagaatctcaggccatcttggatttggtaataagtgatgca
actaaaggaagcgaacctgggaagacaatagcgctgtatgttctggttgcattaatatgt
gttgaccatgagagatacttcttaagccaacttcaaagtagaggatttttaaggacttgc
ctaacgagcatcagcaatttttcaaaccaggatggcgggcattcattggattcattgcag
cgggcaagtacccttgaggctgaattggcattactgttgaggattagctacaaatatggg
aaatctggggcccaagttttgttttccatgggtgccttggagcatcttgcatcatgcagg
gcagtcagtttacagggatgtttgaggcggtttgaccgaaagcttcgtcgagatgtttct
gtagattttgacaaacaatgcatgattgtaacacctatgttgagattgttgttttctttg
acgtcattggttgatacatctgatatattcgaggtgaagaataaaattgttcgtgaagtt
atagattttgtaaaaggacatcagttgctgtttgatcaaattcttcgtgaagatatttcc
acagctgatgaattgactgtggagcagatcaatcttgttgttggcatactttgtaaggta
tggccctatgaagagagtgacgagtttggttttgttcaagggcttttcggtatgatgcgt
gctcttttttcttgtgactctggagctcctactgttggtaaattggcccaatcttctgag
aataaaagcaaggtagaactgaactcgtttcggctatgcttcagtctgggctcttaccta
tatttcttagtcacaaaaatgtctctgagactccaggtctcagacagctccatagattac
cattcccctgctatgctgcagcagcccacattgatgttacttgactctctcctccgttca
gttgcaacttcccttgaaatggctgctgatgagaaatccctgctacttaataagattcaa
gatataaatgaactgtcaaggcaggaggtggatgaaattatcaacatgtgtgctatgcaa
gagtctgtttcttcatccgatgacatacagaagaggaggtatatcgcaatgatggaaatg
tcccgtgtagctggcgaaagagatcagctaattacattgttacttccacttgcagaacac
gtgctggatataatccttgttcattttcgtgaagggtccatggcatctgataatagtgga
gttacaaaagctgttacgtttggcacgcactctgaccccagacaggatctatcttggatg
tgtgggatgttggttcccacattagaacgacttgaactgttgagtgaggataaggtcggc
cacaatctgaaggtgtttcgaagattggtgacatcccttaaagaaatggcaatccaaaac
ctggctttatga
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