Populus alba (white poplar): 118048521
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Entry
118048521 CDS
T07314
Name
(RefSeq) DNA repair protein RAD51 homolog
KO
K04482
DNA repair protein RAD51
Organism
palz
Populus alba (white poplar)
Pathway
palz03440
Homologous recombination
palz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118048521
03460 Fanconi anemia pathway
118048521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118048521
04121 Ubiquitin system [BR:
palz04121
]
118048521
03400 DNA repair and recombination proteins [BR:
palz03400
]
118048521
Membrane trafficking [BR:
palz04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118048521
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118048521
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
118048521
RecA family proteins
118048521
FA (Fanconi anemia) pathway
Other FA pathway factors
118048521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
HHH
Motif
Other DBs
NCBI-GeneID:
118048521
NCBI-ProteinID:
XP_034914133
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All DBs
Position
6:11579309..11583195
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AA seq
343 aa
AA seq
DB search
MEQQRNQKAVNQQKQHEDLEEMQHGPFPIEQLQASGIASLDVKKLKDAGLCTVESVAFSP
RKELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHTQRQEIIQITSGSRELDKILEGG
VETGSITEMYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIAD
RFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRG
ELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHAS
TTRLALRKGRGEERICKVISSPCLAEAEARFQICAEGVTDVKD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaaagaaaccaaaaggctgttaatcaacaaaaacaacatgaggatcttgaa
gagatgcaacatgggcctttccctattgaacagcttcaggcgtcaggcatagcttccctt
gacgtaaagaagcttaaagatgcgggtctctgcacagttgaatctgttgccttttctccc
aggaaagagcttctgcaaattaaaggaatcagtgaagctaaagttgacaaaatcatcgaa
gcagcttccaaactggtgcccctgggttttactagtgctagccaactccatactcagagg
caagagataattcagataacatctgggtcaagagagcttgacaaaattttggaaggaggg
gttgagaccggatctattactgaaatgtatggcgagttccgctctggaaaaactcagctg
tgccacacgctttgcgtcacttgccaacttccattagatcaaggaggaggggagggaaaa
gcaatgtacatagatgcagagggcacattcaggccacaaagactcttacagatagctgat
aggtttgggctgaatggcgctgatgtcttggagaatgtggcttatgctcgggcatataac
accgatcatcaatcaaggcttttgctcgaagcagcttcaatgatggtggaaacaaggttt
gctcttatgatagtagacagtgctactgctctatacagaacagatttttctggaagggga
gaactttcagctcggcagatgcatctagcaaagttccttaggagccttcagaagttagca
gatgagttcggtgtggctgttgtcattacaaaccaagtagttgcacaagttgatggttct
gctatttttgctggacctcaaatcaagcctattggtggtaacatcatggcccatgcttct
acaacaaggcttgctcttcgaaagggaagaggggaggagcgcatctgtaaagtaataagt
tctccttgtttagctgaagctgaagcacggttccagatctgtgctgaaggcgtcactgat
gtcaaggactga
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