Populus alba (white poplar): 118048547
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Entry
118048547 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118048547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118048547
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118048547
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
HECT type E3
118048547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
UTP15_C
Motif
Other DBs
NCBI-GeneID:
118048547
NCBI-ProteinID:
XP_034914190
LinkDB
All DBs
Position
6:complement(11235377..11244448)
Genome browser
AA seq
1575 aa
AA seq
DB search
MGNRGQKRAEMVNELPSDKRACSSLEFRPSSSNSSIQTQINSENHNAETHDADMDTSSSG
SASSHSDEEEPERDSAYGSCDSEGPRHSSLREYQRQRSSGDHSRLRDCLSNLTEGTEPSG
QLAALTELCEVLSFCTEDSLSSTMADSLSPVLVMLSRHESNPDIMLLAIRALTYLCDVFP
RASIFLVKHNAIPAICQRLMAIEYLDVAEQCLQALEKISRDQPLPCLQAGAIMAVLSFVD
FFSTSVQRVALSTVVNICKKLPSENFSPFMEAVPRLCNLLQYEDRQLVENVAICLIKIAE
RVSQLSEMLDELCKHGLINQATHLVQLNSRTTLSQPVYNGLIGLLVKLCSGSVVAFKTLY
ELNISSILKDILTTYDLSHGMSSPHVVDGQGNQVHEVLKLLNALLPIIARDQDVQQHVLD
KETFLANHPKLLQKFGLDIIPSLIQVVNSGANLYVCYGCLCVINKLVYLSKSDMLLELLK
NTNIPSFLAGVLTRKDHHVLMLALQIAETILQKLPDVFVNSFIKEGVFFAIDALLVSEKC
SQLMFPVCNGIQLPFDASLKSSSKVVMRCLCYAFDTGQSLSTTETGTCKLEKESVQNLAK
HIRTSCFASELCNSEKGLTDILQKLRALSAELSDLMNMPGNIGSCTQDEEKCYCVLRQII
EKLDGREPVSTFEFIESGIVKILVNYLSNGKYLREKVEPQGTLDDCDVIEKRFEVFARLL
LSSPDLSVEFPLSVLIQKLQGALSSLENFPVILSHASKQRSSFAIIPTGHCTSYPCLRVR
FVRGKGETCLCDYSEDVVTVDPLSSVDAIEGFLSPKVRIKGTEQIESAAQAMEDVLSAEN
AQFKSPSTANSSQGESSGLMEPDSIATDLPVMQEDEANLSQSPPEPDVNLLQRNPDETTS
SNNTHNVSLEKIVQSPSCADVTTKSHCPMSCSNGDALPKLVFYLEGQRLDQTLTLYQAIL
QQKVKADREINSTAKLWTQVHTLTYGIVVDPEDDSPPDHSSTAQNSSMLDQVGAYMQHPA
FFSSLFNGELTSDLDKYSPTNDVLFLLKSLEGLNRFIFHLMSRERIHAFAEGLIDNLGYL
KVAVHPVSQNEFVSCKLTEKLEQQMRDSLAVSIGGMPVWCNQLMDSCSFLFSFEARCKYF
RLSAFSRQQVQPQPSSHNNSGVSRDGLPNAGSLSRKKFLVLRDRVLESAAQMMDSYAHVK
APIEVEYNEEVGTGLGPTLEFYTLVSREFQKSGLGMWRQDHSSFTTSETLQAEYSGIVNS
SSFGLFPRPWPSSVDASDAAQFSEVIKKFFLLGQIVAKALQDGRVLDLPFSKAFYKLILQ
QELNLYDIQSFDPELGRTLLEFQALVNRKKNMGSAFGENSSTALDACFWNTKIEDLYLDF
TLPGYPDYVLSFDEDHKIVNMVNLDAYVSRIVDATIHIGISRQVEAFKSGFNQVFPIKHL
MIFTEEELERLLCGEREFWAFNELLDHIKFDHGYTASSPPVVNLLEIIKEFEYEQLRSFL
QFVTGAPRLPTGGLASLNPKLTIVRKHCSNCADADLPSVMTCANYLKLPPYSSKDKMKEK
LLYAITEGQGSFHLS
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcgtggacaaaaacgagctgagatggttaatgaattgccctctgataagaga
gcttgtagttcattggagtttagaccaagttcatcgaactcatcaattcaaactcaaata
aattctgagaatcataatgctgaaacccatgatgctgacatggatacttcatcatctggg
tcggcgtcaagccattcagacgaagaagaacctgagagggattcagcatatggctcttgt
gattctgagggtccaagacatagcagtttgcgtgagtatcagaggcagagatcctctggt
gatcatagcagattgagggattgtctatctaatttaactgaaggaactgagccttctggg
cagttagctgctcttacagagttatgtgaagtgctttcattttgtacagaggattcgctt
tcaagtacgatggcagactctttgtcaccggtgcttgttatgctttcaaggcatgagagt
aacccagatataatgctattggctataagggctttaacttatctgtgtgatgtgttcccc
cgagcatccatttttcttgttaagcataatgcaattcctgctatttgtcaaagattaatg
gccattgaatacttggatgtagctgaacagtgcttgcaagcattggagaaaatatctcgc
gatcaaccacttccatgcttacaagctggggcaataatggcagttctaagttttgtagac
ttcttctctacaagtgtacaaagagttgcactttcaactgtggtgaacatatgcaagaaa
ctgccatcagaaaatttttcaccgttcatggaggctgttccgagattatgcaatcttcta
caatatgaggataggcagcttgtcgaaaatgtagcaatttgcttgatcaaaatagcagaa
cgggtcagtcagttgtcagagatgctggatgaactatgcaagcatggactaattaatcaa
gctactcatctagtgcaattgaacagccgaacaacactatctcagccagtatacaatggt
ttgattgggcttcttgtcaaactttgttctggttcagttgttgccttcaagaccctgtat
gagctcaatataagcagcattttgaaggacatattaactacctatgacctctcgcatgga
atgtcttctcctcacgtggttgatgggcagggtaaccaggtacatgaagtgctaaagttg
ctaaatgcgcttctccctattatagcaagagatcaagacgttcaacagcatgtgttggat
aaagagacatttttggctaatcaccctaagctcttgcagaagtttggattggatataatt
ccctcattgattcaggtggttaattctggtgcaaatctatatgtttgctatggctgctta
tgtgttatcaacaagttggtttatctcagcaaatctgacatgcttcttgagttgcttaag
aatacaaacattccaagttttttggctggagttcttacccgtaaggatcaccatgtgctg
atgttagccctgcaaattgctgagacaattctccaaaagcttccagatgtttttgtgaac
tctttcatcaaggaaggtgtattttttgccattgatgcccttctcgtgtcagaaaaatgt
tctcaattgatgttcccggtgtgcaatggcattcagcttccattcgatgctagtctaaaa
tcttcctcaaaagtagtcatgagatgtttatgttatgcttttgatactggtcagtctctt
tcaaccacagaaacaggaacatgcaagcttgaaaaggaaagtgttcaaaatcttgcaaag
cacatcagaactagttgctttgcttcagaattatgcaactctgagaaaggattgacagat
atccttcagaagcttagggctctttcagctgaattgagtgatttgatgaatatgcctggc
aatattggctcttgcactcaggatgaggagaaatgttattgtgtgttgcgtcaaatcatt
gaaaagcttgatggaagagaacctgtgtctacttttgaattcattgaaagtgggattgtg
aagatattagtgaattacttgtccaatggcaaatatctgagagaaaaggtggagcctcag
ggtacattggatgattgcgatgttatagagaaaagatttgaggtgtttgcaaggctactt
ttatcatccccagacctatctgtagagtttcctttatcagttttaatacagaaattgcaa
ggtgcattatcttctttggagaatttccctgttattttgagccatgcatccaagcaaaga
tcctcgtttgcaatcattcctactggacattgcacatcttatccgtgcctaagagtacgt
tttgtcaggggaaagggcgagacatgcctctgtgactactctgaagatgttgtgacagta
gaccctctttcttctgtggatgcaattgaaggatttttatcgcctaaagttagaataaaa
ggaacagagcaaatagaatcagctgctcaagctatggaagacgtgttgtcagcagaaaat
gcacagttcaaatcaccatcaactgcaaactccagtcaaggggaaagttcaggactcatg
gagcctgatagtattgctactgatttgcctgtaatgcaggaagatgaggctaacctatct
cagtctccaccagaaccagatgtaaatttgttgcagagaaatcctgatgaaacaacatcc
tcaaataatactcataatgtctcattggagaaaatagtgcagtctccttcatgtgctgat
gtcactacaaaaagtcattgtcctatgtcctgtagcaatggagatgctctgccgaaactg
gtattttacctagaagggcaacggctggaccaaactttgactctttaccaggcaattctc
cagcaaaaagttaaagcagaccgtgaaattaacagcactgcaaagctgtggactcaagta
cacaccttgacttatggaatagttgtggatcctgaagatgatagtcctccagatcattct
agtacagctcaaaattcctctatgttagatcaagttggggcttatatgcagcatcctgca
tttttctcaagcttgtttaatggcgaactcacttctgacctggataagtatagtcctact
aatgatgtattgtttctgctaaaaagtttagaaggtttaaacaggtttatatttcatctg
atgtctcgtgaaagaatccatgcatttgctgaagggctgattgataatttgggttattta
aaggtagcagttcacccagtatcacaaaatgaatttgtgagctgtaagttgactgagaaa
ttggagcaacagatgcgggattctctggctgtgtccataggtggcatgcctgtgtggtgc
aatcagctcatggattcatgctcctttttgtttagctttgaggctagatgtaaatatttc
cggttgtcagcattcagccgtcagcaagttcaaccacaaccatcatcacataataattca
ggtgtctcaagggacggactaccaaatgctggcagtttgtcccgtaagaaattcctagtt
ttgcgtgaccgagttctggagtctgctgcccagatgatggatagttatgctcatgttaaa
gcacctattgaagtggaatataatgaagaagttggtactggtctcggtccaaccttggaa
ttttacactctggttagtcgtgagtttcagaagtctggccttggtatgtggaggcaggat
catagttcatttaccaccagcgagaccctgcaggctgaatactctggaattgtgaactct
tcttcatttggactttttcctcgcccatggccgtcttcagtggatgcatctgatgcagca
cagttttctgaagttattaaaaagtttttccttctgggacaaattgtagccaaggctctt
caagatgggagggtgctggatctaccattctctaaagccttctataagcttattcttcag
caggaacttaatttgtatgacatccagtcctttgatcccgagcttggtaggacattgcta
gagttccaggctcttgtcaacaggaaaaaaaatatgggatcagcctttggagaaaactca
tctactgctctagatgcatgcttttggaacaccaaaatcgaggatctttatcttgacttt
actcttcctgggtatcctgattacgttcttagttttgatgaagatcacaaaattgtgaat
atggttaacttggatgcttatgtttctcgcattgtggatgctactatacacataggaatt
tccagacaagttgaagcattcaagtctggatttaaccaggtttttcctattaaacatctt
atgattttcaccgaggaggaacttgagcgtttgctatgtggagaacgtgaattttgggct
ttcaatgagcttttggaccatatcaagtttgatcatggatacactgctagcagccctcct
gttgttaatttactggaaatcataaaggaattcgaatacgaacaactacgatcatttcta
cagtttgtaaccggggcacctcggcttcctacaggaggcttggcatctctgaatccaaaa
ttgaccattgtccggaagcattgtagcaactgtgcggatgcggacctccccagtgtgatg
acttgtgccaattatctgaagttgccaccttactcgtcaaaagacaagatgaaagagaaa
cttctgtatgccataacagagggtcaaggatcattccacctctcgtag
DBGET
integrated database retrieval system
