Populus alba (white poplar): 118048693
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Entry
118048693 CDS
T07314
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00450
Selenocompound metabolism
palz00970
Aminoacyl-tRNA biosynthesis
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
118048693
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118048693
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
palz01007
]
118048693
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
palz03016
]
118048693
Enzymes [BR:
palz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
118048693
Amino acid related enzymes [BR:
palz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118048693
Transfer RNA biogenesis [BR:
palz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118048693
Prokaryotic type
Other AARSs
118048693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
CoV_peptidase
tRNA-synt_1e
Anticodon_1
DUF3952
Zn_dep_PLPC
Phage_holin_6_1
Motif
Other DBs
NCBI-GeneID:
118048693
NCBI-ProteinID:
XP_034914373
LinkDB
All DBs
Position
17:complement(7756213..7763167)
Genome browser
AA seq
801 aa
AA seq
DB search
MGDLDRPVPKLPIPGKRNIMITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTATETKAMEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEVCQ
AIFKKLLDNNWLSENTMKQLYCDKCERFLADRLVEGTCPTEGCNYDSARGDQCENCGKLL
NPTELINPRCKQCKNTPRIRDTNHLFLELPQLKDKLVSYIESMSVAGSWSQNAIQTTNAW
LKEGLKPRCITRDLKWGVPVPLDEFKDKVFYVWFDAPIGYVSITSCYTPDWEKWWKNPDN
VELYQFMGKDNVPFHTVMFPSTLIGTGENWTMMKTISVTEYLNYEAGKFSKSKGVGVFGN
DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWSDLQAKLNSELLNNLGNFINRVLSFLAKPP
GLGYGSIIPDAPGADSHPLTKKLAGEVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAY
LQESQFWKLYKEDQPSCSIVIKTSLGLVYLLACLLEPFIPSFSVEVFKQLNLPLEQASLC
DEKGDMDRAKRPWDILPAGHKIGTPEPLFKELKDEEVEDYRRRFAGSQADRLERDEAEKA
AKLAEQLKKKASVGGGKKQQAKKPASEAKSKGSVEREISITRLDIRVGLIKKVQKHPDAD
SLYVEEIDLGEGDCRTVVSGLVKYIPLEEMQDRKVCVLCNLKPASMRGIKSQAMVLAASN
SDHTKVELVDPPPSAVVGERVTFQGFEGEPDDVLNPKKKVWETLQVDLQTNSDLVACYKD
IPLTTSAGVCKVASISCGSIR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgggagatctcgatcggccggtcccgaagctaccgatcccgggaaagcgaaacataatg
ataaccagtgctttgccttatgtcaataacgtccctcatctcggcaacattatcggctgc
gtgctgagtgctgacgtgtttgctagatactgtcgtctccgaggatataatgcgatttat
atttgtggaactgacgagtacggaactgcgactgagactaaagccatggaggagaattct
acccctaaacaaatttgtgacaagtatcacgcgattcatagggaggtttataaatggttt
aatataagttttgatgaatttgggcggacgtcgagtccgcagcaaactgaagtttgtcaa
gcaatttttaagaaattgttagataataactggctttcagagaatacaatgaaacagctg
tactgtgataaatgtgaaagattcttggctgatcggcttgtggaaggtacttgtcctaca
gaaggatgtaattatgactctgcacgaggagatcagtgtgaaaattgtggaaagcttttg
aatccaaccgagttaataaatcccaggtgcaagcaatgtaagaatacaccaagaatccgt
gatacgaaccacttgtttcttgagcttcctcagctgaaggataaattagtaagctatatc
gagagtatgtcagtagctggatcttggagccaaaatgccattcaaacaacgaatgcatgg
cttaaagaaggactaaaaccacgatgcattactagggatctgaagtggggtgttccagtt
ccacttgatgaatttaaggacaaggtgttttatgtttggtttgatgctcctattggatat
gtatccattacttcttgctacactcctgattgggagaagtggtggaagaatcctgataat
gtggagctgtatcagtttatgggaaaagacaatgtaccattccacactgtgatgtttcca
tcaacacttattggaactggtgaaaattggaccatgatgaagactataagtgtaactgaa
tacttaaattatgaagcagggaagttttccaagagtaagggtgtaggagtgtttggaaat
gatgctaaggatacaaatattcctgtagaagtttggagatattatctgctaaccaatagg
cctgaggtgtctgacacactatttacatggtctgatttgcaagcaaaacttaacagcgag
ctgctgaataatttgggcaactttattaatcgagttctgagctttcttgctaaacctcca
ggtttgggatatggttctatcattccagatgctccaggtgccgactcccatcccttgaca
aagaaattggctggagaagttggtaaatatgtagagcagtacctggaagccatggagaag
gttaagttaaagcaaggattgaaaactgcaatgagcatttctagtgaggggaatgcctat
ttgcaagaaagccaattttggaagctttacaaggaagaccaaccttcttgttccatagtt
ataaagacttcattgggtctagtatatcttcttgcatgtttattggaacctttcatacca
tctttctctgttgaggtcttcaagcagcttaatttgcctcttgaacaagcttcactttgt
gatgagaaaggcgatatggatagggcaaaaagaccttgggatatcctacctgctgggcac
aagattgggactccagagcccttgttcaaggaactgaaagatgaagaagtggaggactac
aggaggagatttgctggaagtcaggctgatagacttgagcgggatgaagctgaaaaggca
gccaagcttgccgagcaactgaagaaaaaagcttcagttggtggcgggaagaagcaacag
gccaaaaaacctgcttctgaagccaaatcaaagggcagtgttgaacgagaaatctccatc
acaagacttgatatccgtgttggcttaattaagaaagttcagaagcatcctgatgctgat
tcgttgtatgtggaagaaatcgatttgggtgaaggagattgtagaacggttgttagtgga
cttgtcaaatatatacctcttgaggagatgcaggatcgtaaggtctgcgtcctttgcaac
ctaaagccagcatccatgaggggcattaagtcgcaggctatggttcttgctgcttccaat
agtgaccacacaaaggttgaattggttgatccacccccctccgctgttgttggagagaga
gttacatttcaagggtttgaaggtgaacctgatgatgtcctaaaccctaagaagaaggtc
tgggagacactacaggtggatctgcaaactaacagtgacctggtagcctgctacaaagat
attccattaaccacatctgctggtgtgtgcaaggtcgcgtccattagttgtggttccatt
aggtag
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