KEGG   Populus alba (white poplar): 118048729
Entry
118048729         CDS       T07314                                 
Name
(RefSeq) uncharacterized protein
  KO
K12828  splicing factor 3B subunit 1
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118048729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118048729
   03036 Chromosome and associated proteins [BR:palz03036]
    118048729
Spliceosome [BR:palz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118048729
 Complex B
    118048729
 Complex C
   U2 SnRNP specific factors
    118048729
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    118048729
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N Htt_N-HEAT_1 HEAT_2 HEAT_ECM29 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 118048729
NCBI-ProteinID: XP_034914423
LinkDB
Position
17:complement(6881121..6885464)
AA seq 1267 aa
MDPEIAKTQEERKKMEQQLASLTSLTFDRDLYGGVDRDAYETSIPATDDEEPDVGLNEVA
QKLASYTAPKSVLKEMPRGGDDSEEVNGFRKPSRIIDREDDYRRRRLDRIISPERHDPFS
AGEKTPDPSVRTYSDIMKEESLKRQKEELLREIAKKKKEEEEARAEKGDKGEKEANSMAK
RRNRWDQSTEDGGNAAKKAKTGSDWDLPDATPGIGRWDATPTPGRIGDATPGAGRKNRWD
ETPTPGRVVDSDATPAGGVTPGATPAGVTWDSTPKGMVTPTPKRQKSRWDETPASMESAT
PALGGVTPSLGGATPGPTPLGAIDMATPTPNALAMRGAITPEQYNLLRWEKDIEERNRPL
TDEELDAMFPQEGYKILEPPASYVPIRTPARKLLATPTPMGTPLYSIPDENRGQQFDLGQ
EPPAGLPFMKPEDYQYFGALLNEEDEEELSPEEQKERKIMKLLLKVKNGTPPQRKTALRQ
LTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVI
EPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASA
LGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDEN
QKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMD
AMYANYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIRSDILPEFFKNF
WVRRMALDRRNYRQLVETTVEIANKVGVKDIVGRIVEDLKDESEPYRRMVMETIEKVVTN
MGSSDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIK
WRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLGEEYPEVLGSILGAL
KAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMR
ICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIA
IVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDAL
MDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHVINAVMEAIEGM
RVALGPAVVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPILDDEQNNIYSR
PELMMFV
NT seq 3804 nt   +upstreamnt  +downstreamnt
atggaccccgaaatcgccaaaacccaagaagagcgcaagaaaatggaacaacaacttgcc
tctttaacctctttaaccttcgatcgtgacttgtatggtggagtcgaccgtgatgcttat
gaaacatcgatcccagctaccgatgatgaagaacccgacgtgggtcttaacgaggttgct
cagaaactcgcttcttatactgccccgaaatcagttcttaaagaaatgcctcgtggcggt
gatgatagtgaagaagttaatgggtttaggaagccgtcgaggattattgatcgtgaggat
gattacaggaggaggagattggataggattatttcgccggagaggcacgatcctttttct
gccggggagaaaacgccggatcccagtgtgaggacttattcggatattatgaaggaagag
tctttgaaaaggcaaaaggaggaacttctaagggaaattgccaagaaaaagaaggaagaa
gaggaagcgagggctgagaaaggtgacaagggtgaaaaggaggcgaattcgatggctaag
aggaggaacaggtgggaccaatcgacggaggatggtggaaatgcagctaagaaggcgaag
acgggttcggattgggatttacctgatgctacaccggggattgggaggtgggatgcgaca
cctactccagggaggataggggatgctacgccaggtgctgggaggaagaataggtgggat
gagactcctacaccggggagagtggttgattcagatgccactcctgcgggtggggttaca
ccaggggcgactcctgctggtgttacttgggattctactcccaaaggaatggttacacct
acaccaaaaaggcaaaagtctcgttgggatgagactccagctagtatggagagtgcaact
cctgctcttgggggggttactcctagtcttggtggtgcgactcctggacctactcctctt
ggtgcaattgatatggctactccaactcctaatgcacttgccatgcgtggggctataact
cctgagcaatataacttgctgagatgggagaaggatattgaggagaggaataggccattg
accgatgaggagttggatgctatgtttcctcaagaagggtacaagatcttggagccgccg
gcttcttatgtgcctatcaggacaccggcaaggaagttgttggctaccccgacaccaatg
gggactcctctttattctattcctgatgagaacagaggccaacagtttgacctggggcag
gagcctcctgctgggttgccatttatgaaacctgaggattatcaatattttggggctttg
ctgaacgaggaagatgaggaggagttgtcaccagaggagcagaaagagaggaagattatg
aaactgctacttaaagtgaaaaatgggacacctccacagaggaagactgctttaaggcaa
ttgactgataaggctagagagtttggcgctgggccattgtttaacagaattttaccgctg
cttatgcagcctaccttggaggatcaggagaggcatcttctggttaaggtaattgatagg
gttttgtataaattggatgagttggttaggccctatgttcataagattcttgttgttatt
gaaccactcttgattgatgaggattattatgcccgtgtagaagggagagagattatttct
aatttgagtaaagcagccggtttggccaccatgattgctgctatgcgtcctgatattgat
aatattgatgagtatgttaggaacacaactgcaagagctttcagtgttgttgcttctgct
ctcgggattcctgcactgttgcccttcttgaaagctgtgtgccagagtaagaaatcctgg
caagctcgccatactggaatcaaaattgttcaacagattgctattttgattggctgtgct
gttcttccccatttgcgatcccttgtggaaatcatagagcatggtctgaatgatgagaat
cagaaggtgaggacaatcactgccttgtccttggctgctcttgctgaggctgctgcccca
tatggtattgaaagctttgactctgttctgaagccattgtggaaggggattaggtcacac
cgtggcaaggtcttggctgccttcttgaaagcaattggttttattattcctctcatggat
gctatgtatgccaattactataccaaggaagtcatgtttattctgatacgtgagtttcaa
tcacctgatgaagaaatgaagaagattgtgttgaaggtggttaagcaatgtgtgagtaca
gagggtgtggaagctgactatatacgttctgatattctacctgagttctttaagaacttc
tgggttagaagaatggccttggataggagaaattacaggcaacttgtagaaacgactgtt
gagattgctaacaaggttggtgttaaagatattgttggcagaattgttgaggatctgaaa
gatgagagtgaaccttacaggcgtatggtcatggaaacaattgagaaggttgtgacgaac
atgggttcatctgatatcgatgctaggttggaagagcttttgattgatggtattctctat
gctttccaagaacagaccagtgatgatgctaatgtgatgcttaatgggtttggtgcggtt
gtcaattctcttggacagagggtgaaaccttaccttccccagatttgtggaaccattaag
tggcgcttgaacaacaagagtgctaaagtgagacagcaagctgctgatcttatatctaga
attgctgttgtcatgaagcagtgccaggaagaacaactgatgggccatcttggtgtagtg
ttgtacgagtatttgggagaagaataccctgaagttcttggatcgattctaggagctctc
aaagcaattgtcaatgtcattggtatgaccaaaatgactcctcctattaaggacttgctt
ccaagattaacaccaattctgaagaataggcatgagaaagtccaggaaaactgtattgat
cttgttggtcgtattgctgatcgtggagctgagtttgttcctgccagggagtggatgagg
atttgttttgagcttcttgagatgcttaaggcccacaagaagggtattcggcgtgctact
gttaacacttttggttacattgctaaggccattgggcctcaggatgttttggctacgtta
ttaaataacctcaaggtccaggagcgccaaaaccgtgtttgcacaactgttgcaattgct
atagttgcagaaacctgttcaccctttacagtcttgcctgccttgatgaacgaatatcgt
gtcccagagcttaatgtgcagaatggtgtcttgaaatccctctctttcctgtttgagtac
attggtgaaatgggtaaagactatatctatgcagtgactccattacttgaggatgccctt
atggacagagatctagttcacaggcagactgcagcttccgctgttaagcatatggctttg
ggtgtggctggtttgggttgcgaggatgcattggtccacttgcttaactatgtttggccc
aacatttttgagacgtcccctcatgttataaatgctgtcatggaagccattgaaggaatg
agggtggccttaggccctgctgttgtgttgaattactgtctccagggactgttccatcct
gcccggaaggtcagggaagtatactggaagatctacaattctctgtatattggatctcag
gatgcccttgtggcagcttatcctatactggacgatgagcagaataacatatatagtaga
cccgagttgatgatgtttgtttaa

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