Populus alba (white poplar): 118048928
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Entry
118048928 CDS
T07314
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
palz
Populus alba (white poplar)
Pathway
palz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118048928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118048928
Spliceosome [BR:
palz03041
]
Complex C
Other components
Step II factors
118048928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_IFT140_1st
PAN2_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
118048928
NCBI-ProteinID:
XP_034914667
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Position
10:8365681..8370814
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AA seq
574 aa
AA seq
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MDLLQNYQNDGELDQNPNSSPDSSPPRLLPSKSAAPKVDDTMLALTVANQMLSKPIDPVQ
HVVAFNPTYDQMWAPVLGPAHPYAKDGIAQGMRNHKLGFVEDAAIDSFVFDEQYNTFHKY
GYAADPSASAGNNYIGDLDVLEKNNGISVYNIPQHKQKKRKIEKKTEAVEDDDDGMDKEE
VENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEHARKKEEKAGGEKGELVADKT
TFHGKEERDYQGRSWIAPPKDAKASNDHCYIPKRLVHTWSGHTKGVSAIRFFPKYGHLIL
SAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGYDKNIKYWDTETGQ
VISSFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTIT
FVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPSMNWLAAQSLDNQI
LIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRT
LKCHEGVCIGAEWHPLEQSKVATCGWDGLIKYWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccaaaactaccaaaacgacggagaattagaccaaaaccctaattcctct
ccggattcatcccctccacgtctgctcccttccaaatccgccgctcccaaagtcgacgac
accatgctagccctaacagtagccaatcaaatgctctctaaacctatcgaccctgtccag
catgtcgtcgctttcaaccctacctacgaccagatgtgggctccggttttaggccccgcc
catccctacgccaaggacggcattgcccagggcatgcgcaaccacaagctcggcttcgtc
gaggacgccgccattgattccttcgtcttcgacgagcagtacaacactttccacaagtat
ggctacgcggctgacccctctgcttctgcaggtaataattatattggtgatttggatgtt
ttagaaaaaaataatgggatttctgtttataatattccgcaacataaacaaaagaagcga
aagattgagaagaaaacggaagctgttgaggatgacgatgatggaatggacaaggaagag
gttgagaatccggctacggatgcgtggttgatgaagaataggaagagcccttgggctggt
aagaaggagggattacaaactgagttgactgaagagcagaaaaaatatgcggaagagcac
gcgaggaagaaggaggagaaagctggtggtgaaaaaggtgagcttgttgctgataagact
acttttcatggaaaagaagagagggattatcaagggaggtcgtggattgcgccacctaaa
gatgctaaagctagtaatgatcattgttatatacccaagagattggtgcatacatggagt
ggccatactaaaggagtttctgctataaggttttttcctaaatatggccatttgatactt
tctgcgggtatggatacgaaggtgaagatatgggacgtgtttaattcgggaaagtgtatg
agaacttatatgggtcattctaaggctgtcagggatatttcattttgtaacgatggctcc
aagtttttaactgctggttatgataagaatattaagtactgggacacagaaacgggccag
gttatctcttcgttttcgactgggaagattccatatgttgttaagctcaatcctgatgat
gataagcagaatatattgttggcgggtatgagtgataagaagattgtgcagtgggatatg
aacacagggcagattactcaggagtatgaccagcatttgggggcagtgaataccatcaca
tttgtggataataacaggagatttgttacttcaagtgatgataaatcactccgtgtatgg
gaatttgggatccctgttgttattaagtatattagtgagcctcacatgcattctatgcca
tcgatctctcttcatcccagtatgaattggcttgctgcgcagagtttggataaccagatt
cttatttatagtactagggaaagattccagttgaataagaagaagaggttcgctggtcac
attgtggctggttatgcttgtcaagtgaatttctcaccagatggaagatttgttatgtca
ggagatggtgagggtaaatgctggttttgggactggaagagttgtaaagttttcaggacc
ctcaaatgtcacgagggagtctgcattggggctgagtggcatccgctggagcaaagtaaa
gtggccacttgtggctgggatggattgattaaatactgggactag
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