Populus alba (white poplar): 118049070
Help
Entry
118049070 CDS
T07314
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
palz
Populus alba (white poplar)
Pathway
palz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
118049070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
palz03400
]
118049070
DNA repair and recombination proteins [BR:
palz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
118049070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
118049070
NCBI-ProteinID:
XP_034914845
LinkDB
All DBs
Position
4:8081027..8088638
Genome browser
AA seq
963 aa
AA seq
DB search
MRTRSNSKQSSGKESTASAIRDVDSESLADMSNEAVDKLVRRVKGRGSSGKKKQDNRLQC
DSAATGENGLKSNGKQVVDARVTWNDLDARGLAQDPAANDTTEVEGGGFQTAFQESDQEM
DDIDWEDGSSSILGHVKNHPGDGIREVTIEFCESPDSAKRKPIRRATAEEKGLAELVHKV
HLLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLGDSKLHAKALSPLAHWFHNNFHV
VSSVSEKRSFHSALSCALETREGTLEELAALSVALFRALKLATRFVSILDAASIKPDADN
YESLNQDTSKMHRGIFNTSTLMVDRPKEVSIPPKSPSCSEKKNVAETSSKASCKSKDNCS
RSKKIQSNDSPPAVELKDNMVDAFPCEAQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAM
SATAVAIQSNKELDVKESNSNSSDVSSPFKRIRKNANEESSSQGISTALGSRKIGSPLYW
AEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSSRYVVAFAGLGAKDVTRRYC
MKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHADASNEHENVVASGLSDLP
MPNELPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMELETRALTEPLPTNQQAYKNH
SLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRTKERWLREGMQVKAKELPAK
VVKQSGKLKKVQFSEDDDYGETDSGVVELYGMWQLEPLQLPHAVNGIVPKNERGQVDVWS
EKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGRSVPVFDGIVVCNEFKDAILE
AYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNNSYGNGLMPSNVQNTNNQPDV
HVGSAQPPGHQKDAKDRKLNAPSMTLTDDHEHVFLVEDQSFDEETSTRTKRCHCGFSVQV
EEL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaagaagcaacagcaaacaatcttcagggaaggagagtacagcgagtgctata
cgtgatgtggatagtgaaagtctagctgacatgtcaaatgaggcagtggataagcttgta
agacgtgtgaaggggcggggatcatctgggaagaagaaacaagataatcggctgcaatgt
gattctgctgccactggtgagaatgggctaaaaagtaatggaaaacaagttgtagatgca
agagttacttggaatgacttggatgctcggggtcttgctcaagatcctgccgcaaatgac
actacagaagttgaagggggaggttttcagactgcttttcaagagagtgatcaagagatg
gatgacatagattgggaagatggttcgtcttccatactgggtcatgtaaaaaatcatcca
ggtgatggcattagggaggttactattgaattctgtgagtcgcctgactctgctaaacgg
aagcccattcgtcgagctactgctgaagaaaagggattggctgagcttgtgcataaggtt
cacctcctttgtttacttgcaaggggcagaataattgatcatgcttgtgatgatcctctc
attcaggcctctttactttctattctaccggcgcatttgtcgaatacattaggggactca
aaacttcatgctaaggctttatctcctcttgcccattggtttcataataactttcatgtt
gtaagttcagtcagtgaaaagagatcatttcattctgctttgtcatgtgctcttgaaact
cgcgaagggactctagaggagcttgcagcattatctgtggcactatttagagctttgaag
ctcgcaacccgatttgtatccatccttgatgctgcttccataaaacctgatgctgacaat
tacgagtccttgaatcaagatacaagtaaaatgcataggggaatattcaacacttcaaca
ctgatggtggatagaccaaaagaggtttccatacctcctaaatctccctcatgcagtgag
aaaaaaaatgttgccgaaacctcatccaaggcttcatgcaaaagtaaagataactgttca
aggagcaagaaaattcaatctaatgattctcctcctgctgttgaactaaaagataatatg
gtagatgcatttccatgtgaggcacaaaataacacttctgaagaatgtgttaccaagaaa
tctcagggttcaaagaggaaaggtgatcttgagtttgagatgcagttgcaaatggccatg
tctgcaacagcagttgcaattcaaagtaacaaagaattggatgtaaaagaatcaaatagt
aattcatctgatgtctcttctccatttaagagaatcagaaaaaatgcaaatgaagaatct
tcctctcagggaatctcaactgctcttggatccagaaaaataggatctcctctttattgg
gcagaagtatactgcagtggagaaaatctgacaggaaagtgggtgcatgtggatgctgta
catgatattgtagatggagagcagaaggtggaagctgcagctgatgcttgcaaaacatct
tcgagatatgtagttgcttttgctgggcttggggcaaaagatgtgactcgcaggtactgt
atgaagtggtacaagatagcatcacaaagagttaactcgctttggtgggatgctgtattg
gccccactgagggagttagagtcaggagcaactggaggtatggcacatttggaaaagccc
catgctgacgcctcaaatgaacatgaaaatgtggtagcatcaggattgtctgatcttcca
atgcctaatgaacttccaagcaatgttgacttgcccaaagaatctgggaggaagaatgat
gtagaatcttctggcaggaattcttttgctgctactagaaacaccattgaggatatggaa
ttggaaactagggcactaactgagcctcttcctactaatcagcaggcatacaaaaatcat
tcgctatatgcaattgaaaaatggcttacaaagtgtcaaatacttcatcctaagggtcct
attctgggattttgttctggacaccctgtttatcctcgtgcttgtgtacagacactcaga
acaaaagagagatggctgcgtgaagggatgcaagttaaagcaaaggaacttccagctaag
gtagtgaaacaatctggaaagcttaagaaagtgcaattttccgaagatgatgattatggt
gagactgattccggagttgttgaactttatggaatgtggcagctagaacccttgcaactt
ccccatgctgtaaatgggattgttccaaagaatgaacgaggtcaagttgatgtgtggtct
gagaaatgcctgccaccagggactgtgcacttaagattgccaagggtattttatgttgcc
aagagactggaaattgactatgcacctgccatggttggttttgaatttagaaatggtaga
tctgttccagtctttgatggtattgttgtgtgcaatgagttcaaggatgcaatattagag
gcatatgctgaagaagaagagagaagagatgctgaagagaagaaaagaaatgaagcgcaa
gctatttctaggtggtatcaacttctttcatcaatcataaccagacaaaggctgaacaac
tcgtacgggaatggtttgatgccaagcaatgtccaaaatacaaataaccagccggatgtg
catgttggtagtgcacaacctccaggacaccaaaaagatgcaaaggatcgtaagttaaat
gctccatcaatgactctaacagatgaccatgagcatgtgtttttggtagaggatcagagt
tttgatgaggagacctcaacaaggacaaagcggtgtcattgtgggttttcggtccaagta
gaggaattgtag
DBGET
integrated database retrieval system
