KEGG   Populus alba (white poplar): 118049256
Entry
118049256         CDS       T07314                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
palz  Populus alba (white poplar)
Pathway
palz04120  Ubiquitin mediated proteolysis
palz04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118049256
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    118049256
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:palz04121]
    118049256
Enzymes [BR:palz01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118049256
Ubiquitin system [BR:palz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118049256
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     118049256
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR75_1st WD40_like Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Peptidase_S9 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 118049256
NCBI-ProteinID: XP_034915097
LinkDB
Position
2:2751841..2756637
AA seq 474 aa
MALLAEKKRKMEQEEADTNMRTLLDFLYCLSKQKLDDLNEIQTDLQYIEEDINSVEKKLI
ELSRANDRFSLKLGMFADDPNSKFVTQSGPIASKKKWVHAQLNALQECYLQKRRNWVRQA
CKEEERDTDTLNREGYNPGLEDFQSVLTNFTRCSQLRVVAELRRGDLFHSANIVSSIEFD
RDDELFATAGVSRRIKIFEFSKVMDEPEDVHCPVVEMSTRSKLSCVSWNKYMKNHIASSD
YEGIVTVWDVTTRQSIMEYEEHEKRAWSVDFSQNEPSMLVSGSDDCKVKIWSTKQEASVL
NIDMKANICSVKYNPGSSIHVAVGSADHRIHYYDLRNICQPLYVFSGHRKTVSYVKFLSS
NELASASTDSTLRLWDVKENLALRTFRGHTNERNFVGLAVNSEYIACGSETNEVFVYHKA
ISKPAASHRFSVDLENGGDDAGSYFTSAVCWKSDSPTMLAANSQGTIKVLVLAA
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggccctccttgcagagaaaaagagaaagatggagcaagaagaagcagatacaaatatg
cgaactttacttgacttcttgtattgcctcagcaagcaaaagcttgatgatctcaatgag
attcaaacagatctccagtacattgaggaggacataaattctgtggagaagaaactaata
gagttgtccagggcaaatgacagattctcactgaaacttgggatgttcgctgatgatcca
aattctaagtttgttactcaatcaggaccaattgcatctaaaaagaaatgggtccatgca
cagctcaatgctttgcaagaatgttacttgcaaaagcgtcgaaattgggttagacaagca
tgtaaagaggaagagagggatacagatactttaaatagagaaggatacaatccaggcctt
gaggatttccaatccgtgctaaccaatttcactcgatgcagtcaattgagggttgtcgct
gaacttagacgaggtgaccttttccactctgctaacatcgtgtctagtatagaatttgat
cgtgatgatgaactgtttgctactgctggagtttctaggcgcattaagatttttgagttt
tccaaagtcatggatgaaccggaagatgtgcattgtcctgttgtcgaaatgtccacgcga
tctaaactcagttgtgtgagctggaacaagtatatgaaaaatcatattgctagcagtgat
tatgaggggatagtaacagtgtgggatgtaactactcgccagagcataatggagtatgag
gagcacgaaaagcgagcttggagtgttgatttttcacagaatgaaccttcaatgcttgta
tctgggagcgatgactgcaaggtgaaaatttggagcacaaagcaagaggcaagtgttctc
aacattgatatgaaagcaaatatctgttctgtcaagtataatcctggatccagcattcat
gtggcggtgggatctgctgatcatcgtattcactattatgacttgagaaacatttgccaa
ccactttatgtgtttagcgggcatcggaaaactgtttcatatgtgaaatttctatccagt
aacgaactggcttctgcatctactgacagcacattgcgcttatgggacgtgaaggaaaat
ctagcactgcgtacatttagaggccatacgaatgagagaaactttgtgggtcttgcggtg
aatagtgaatacattgcttgcggcagcgaaacaaatgaagtgtttgtgtatcacaaggct
atctctaagcctgcagcttcgcatagatttagtgtagatttggagaatggtggcgatgat
gctggatcatacttcactagtgctgtgtgttggaagagtgatagccctacaatgctagct
gcaaatagtcaaggaaccattaaagtgcttgttcttgctgcttga

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