Populus alba (white poplar): 118049476
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Entry
118049476 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118049476
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118049476
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
118049476
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
118049476
NCBI-ProteinID:
XP_034915372
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Position
14:4515767..4517731
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AA seq
350 aa
AA seq
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MSAPPDLFTTTPTDTASGGTKSSPFQNLNSSILIIILILSITLLVSVSLCFLLRVLNRRC
LSHLSPSRTTATTTTTTAPSSSNNRHSGNNNHRVSPETLEPSIADSLPLFSFSSIKRRSS
SSPAISGGDCAVCLSKFEPDDLLRLLPLCCHAFHAHCIDTWVNSNQSCPLCRSPILISES
DLAKAISDVEARGGDSFRLEIGSISRREHPAPNSASSLSTSAASFAAGEHRSSYSVGSFD
YVVEEESEVTINQSHRRSMSKESGGGGGPTLSEQQILAAEVAPARGSWLREYVDRLSTSL
SSRTASFRGSGRFFTGSSRRSEIAGVGDYDLEANRVGEEISELFRWFSGV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcccccagacttgttcaccacaacacccaccgatacggccagcggaggcacc
aagtcttcgccgtttcagaaccttaactcaagcatcttgatcatcattttaatcctctcc
atcactctgttagtctctgtttctctttgcttccttcttcgtgtcttaaaccgccgttgc
ctcagccacctctctccctctagaaccaccgccacaactaccacgacaacagccccctcc
tcctctaataaccgtcactcaggtaacaacaaccaccgtgtttcaccagaaaccttagag
ccttccattgctgactcacttcctctcttctccttttcctccatcaaacggcggtcatcc
tcctcccctgctatctccggcggcgattgcgcggtttgtctgtccaagttcgaaccggat
gatctcttgcgattacttccgctttgttgtcatgctttccatgcacattgcattgacacg
tgggtcaattctaaccaatcatgtcctctctgccggtctcctattcttatatcggagtcc
gacctcgccaaagctatctccgatgtcgaagctcgcggtggtgatagtttccgccttgag
attggttctattagccgccgagaacatcctgctcctaactcggcctcctctctctccaca
tccgccgcctcctttgctgcaggcgagcatcggagctcgtactctgttggttcgtttgat
tacgtcgtggaggaggaatcggaggttactatcaatcaatcacacaggaggagcatgtcg
aaggagagtggtggcggtggcggtccgacattgtccgagcagcagattttggcagcggaa
gtggctccggcgagaggaagttggttaagagaatacgttgaccgtctatcgacttctctc
tcttcacgcacggcatcgtttagaggttctggaaggttctttacgggaagcagtcgccgg
agcgagatcgccggtgttggggattatgatttggaggcgaaccgtgtaggagaagaaatt
agtgaactgtttcgttggttttcaggggtataa
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