Populus alba (white poplar): 118049521
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Entry
118049521 CDS
T07314
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
palz03041
]
118049521
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118049521
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
118049521
NCBI-ProteinID:
XP_034915415
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All DBs
Position
17:complement(12864212..12870867)
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AA seq
472 aa
AA seq
DB search
MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCEPFGKIVNTKCNVGNNRNQAFVE
FAEQNQAIQMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDNPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGYVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PEHVGSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIDGPVQSTVGADGKKKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVATAAVAKE
TLEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTIPDASFLTAQAPGPHAAPTTWQ
NPQAGSMYLGSNYATTAAAPAQVPPGQVAAWDLTMQAGGPGYASVRGMYPGQTYPTPPAY
ASSAIPPGSSPHSYSSPISPGVASMGMTHPGGQPNMRPGGASPPGQTPYYGR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgtccggacagccacaattccgatacacacaaacaccatcaaaggttttgcat
ctgcgaaaccttccatgggagtgcacagaagaagagcttatcgagctctgtgaacctttc
ggaaagatcgtcaacactaagtgcaatgtcggcaacaatcgcaaccaagccttcgttgaa
ttcgcagaacaaaatcaggcaatacaaatggtatcgtattacgcgtcgtcatcggagcca
gcgcaggttcggggtaaaacggtgtatattcaatattcgaatagacatgaaattgtgaac
aataagagtccaggtgataatcctggaaatgtattgctggttaccattgagggtgttgaa
gctggtgatgtcagcatcgatgtcattcacttggtgttttctgcttttggctatgtgcac
aaaattgctacttttgaaaaggctgctggtttccaggcattaattcaattcactgatgct
gaaactgcatcttcagcgagaaatgccttggatgggagaagcatacccaggtacctgctt
ccagagcatgttggttcctgcaacctacgcatttcatattctgcacatactgatctcaat
atcaagttccagtcccataggagcagagactatacaaatccgtatcttcctgtgaatcct
actgcaattgacggacctgttcagtctactgtaggtgctgatgggaaaaagaaagagcct
gagagcaatgtacttcttgcatcaattgagaacatgcagtatgctgtcaccgtggatgtt
cttcacacggtattttctgcatttggtactgtccagaagattgctatatttgagaaaaat
ggtggaacacaggcactgattcagtacccagatgttgcgactgcagcagtagccaaagaa
actctggagggacactgcatttatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcctttagtgataaaagtagagattacaccatcccg
gatgcaagttttctcacagcacaagctcctggcccccacgctgctcccacaacttggcag
aatcctcaagctggttcaatgtacctagggagtaactatgccaccacagctgctgctcct
gctcaagttcctcctgggcaagtggcagcttgggatctgactatgcaggcgggtggacca
ggctatgcatcagttcgcggtatgtatcctggtcaaacatatccaacacccccagcatat
gcttcctcagcaatacctccaggttcctctccccattcatatagcagcccgatttctcct
ggtgtggcttcgatgggaatgactcacccaggggggcagccaaacatgcgacctggtggg
gcttcacctcctggtcagactccatattatggtcgatga
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