Populus alba (white poplar): 118049552
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Entry
118049552 CDS
T07314
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
palz
Populus alba (white poplar)
Pathway
palz04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
118049552
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
palz04040
]
118049552
Ion channels [BR:
palz04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118049552
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
118049552
NCBI-ProteinID:
XP_034915474
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Position
17:complement(13280925..13285857)
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AA seq
718 aa
AA seq
DB search
MPSQTNSHFSLPRWIGLLSHKNSQSETGDNNDNSNLNSTNNIDDSNPISNSIECYACTQV
GVPVFHSTSCDQAHQPEWEASAGSSLVPIKNRLGSRKSPASRAQSRRPAGPFGTILDPRS
KRVQKWNRAFLLARGMALAVDPLFFYALSIGRNGAPCLYMDGGLAAIVTVLRTSVDAIHL
CHLWLQFRLAYVSRESLVVGCGKLVWDARAIASHYVRSLKGFWFDAFVILPVPQAVFWLL
VPRLIREEQIKLIMTILLLIFLFQFLPKVYHCICLMKRMQKVTGYIFGTIWWGFGLNLIA
YFIASHVAGGCWYVLAIQRVASCLRQSCERRPNCDLSLACSEEVCYQFLLRSGTIGNPCV
GNTTHTVRKPMCLDVNGAFNYGIYKWALPVISSNSLSVKILYPIFWGLMTLSTFGNDLEP
TSHWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCGDMEWWMRRRQLPS
RLRQRVRHYERQRWATMGGEDEIELITDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLIL
DNICDRVKPLVFSKDEKIIREGDPVQRMVFIVRGRIRSSQSLSKGMVATSVLEPGGFLGD
ELLSWCLRRPFIDRLPASSATFACIESTEAFGLDANHLRYITDHFRYKFANERLKRTARY
YSSNWRTWAAVNIQFAWRRYRMRTRGPVIPVTESGGTERRLLQYAAMFMSIRPHDHLE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccttcccagaccaactcccacttctcccttccaaggtggattggattactgtctcac
aagaacagccaaagcgaaactggtgacaataatgacaacagcaaccttaacagtaccaac
aacattgacgacagcaaccctatctctaactccatagaatgctacgcttgcacacaagta
ggagttcctgtcttccactccacaagctgtgaccaggcccaccagcctgaatgggaggcc
tccgcgggctcatcattagtccccatcaaaaaccggctaggttcaagaaagagcccagca
agccgagcccaatctcgccggccggccggtccattcggaaccattctcgatccacgtagc
aagcgggtacagaaatggaaccgggctttcctgctagcacgtggcatggctttggcagtc
gatcccttgtttttctacgctctgtcgatagggagaaacggggccccttgcttgtacatg
gacggtgggttggccgcaatcgtgaccgtccttcgcacgagtgtggatgctatacacttg
tgccatctgtggttacaattcaggttggcttatgtgtcaagagagtctcttgtcgtgggg
tgcgggaaactggtgtgggacgcacgtgccatcgcatctcattacgtgaggtctcttaag
ggcttctggtttgatgcttttgtcattcttcccgttcctcaggctgtattttggttactt
gtacccagattaatcagagaagagcagattaagctcataatgacaatacttttgctgatc
ttcttgttccaattcctccctaaggtgtaccactgcatatgtttgatgaaaagaatgcaa
aaggtcacaggttatatctttggcaccatttggtggggcttcggccttaatctcattgcc
tacttcattgcctctcatgttgctggtggatgttggtatgtcctcgcaatacaacgcgta
gcttcatgtctcaggcagagttgtgagaggaggcctaattgtgatctctctttggcttgc
tcggaggaggtttgctatcagttcctgttacgatcaggcacaattggaaatccatgcgtt
ggaaacacaacacatactgttagaaagcctatgtgcctggatgttaatggagctttcaat
tatgggatttacaagtgggctcttccagtcatttctagcaattctttgtctgtgaagatt
ctttatcctattttctggggtttaatgaccctcagcacctttggcaatgatcttgaacca
acaagtcactggctagaagtaatcttcagtatatgtatcgttctcagtggtttaatgctc
ttcactctactgattgggaacatccaggtgttcttgcacgcggtcatggcaaagaagaga
aaaatgcagctgagatgcggagatatggaatggtggatgaggaggagacagttgccttct
cgtttgagacagagagttcgccattatgaacggcagagatgggcaaccatgggaggtgaa
gatgagatagaactaatcacagacttacctgaaggactccggagagatatcaagcgctat
ctttgcctagatcttatcaagaaggttcccttgttccacaacctggatgatcttattctt
gacaacatctgtgatcgggttaagccccttgttttttctaaagatgagaagataatcaga
gaaggagacccagtgcaaaggatggtgttcattgttcgtgggcgtataaggagtagccag
agtcttagcaaaggcatggtggcaaccagtgtgcttgagccagggggcttcctgggtgac
gagctgctatcctggtgtcttcgccgtccattcatagaccgacttccagcctcatcggcg
acatttgcttgtattgaatcgacagaagcatttggtcttgatgcaaaccatctccggtac
atcacagatcacttccgctacaaatttgccaacgaaagactcaagagaactgcaagatat
tactcatcaaactggagaacatgggcagcagtcaatatacaattcgcttggcgacgttac
agaatgaggacgaggggaccggtgattcctgtaacagaaagtggaggtactgagcggcgg
ctcctgcagtatgctgcaatgtttatgtcaatcaggccacacgaccaccttgaataa
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