Populus alba (white poplar): 118049640
Help
Entry
118049640 CDS
T07314
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X2
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palz01002
]
118049640
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
palz04131
]
118049640
04121 Ubiquitin system [BR:
palz04121
]
118049640
Enzymes [BR:
palz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118049640
Peptidases and inhibitors [BR:
palz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118049640
Membrane trafficking [BR:
palz04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
118049640
Ubiquitin system [BR:
palz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118049640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-RING_11
Cyanate_lyase
Motif
Other DBs
NCBI-GeneID:
118049640
NCBI-ProteinID:
XP_034915582
LinkDB
All DBs
Position
7:complement(10540450..10546271)
Genome browser
AA seq
539 aa
AA seq
DB search
MKRNWVSASGLAAVLGVAGLVLALIKDPKSWNLKLSALPSWLELNQRENNNRPKKLFLLP
GLQNLGNNCFLNVILQALGSCSNFQSFLQKVIEEWESFAGEEWNESLQLTVALAALLEEL
SVISTERIVLSPRKVMLAMAHYIQNFNLTSQQDAEEAFLHLLSSLRDEFSDSYLPKHHSL
TDAFASPNCRILTQDRIEIQSEQERWQQHFLGPFDGILSSILMCQSCSTEISLNFQFFHS
LPLLPVLEGGATIRVGCRLEDCLRQFTVSEQVENYSCSHCWHIAAIKYLSLRGATETEIK
RLKSCNEQDSCTCHLLVHLENLPWSNNFSRTLKQLSIARSPKILCIQLQRASINFFGEVV
KLQGHISFPLTLNLLPFMMKEMQCQKPSSHLNHFDVQYDTRMLNSIYERNASKLLSANAF
RSPTHTEAFLGQSKIPQTTDIFSSQANEKVSAACELVPSEPQVYRLVSVVEHFGRACGGH
YTVYRSLQSESHEEHPDENCKPSLVHWFCISDSNVYRVSEEDVLAAEASLLFYERIVES
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggaattgggtttcagcatctgggcttgcagctgttttgggggttgctggtttg
gtgttggctctaataaaagatcccaaatcttggaatctaaaactaagtgccttgccttct
tggctggaattgaaccagagagagaataataatcgtccaaagaagcttttcttgcttcct
ggcctgcaaaatcttggcaataattgctttttgaatgttatcttacaggctttaggtagc
tgttcaaatttccaatcttttcttcaaaaggttatagaagaatgggaatcatttgccggt
gaggaatggaatgagagcttgcagcttacggtggctttggctgctttattagaggaactg
tctgtgattagcacagagagaattgtattgagtccaagaaaggtgatgcttgcaatggct
cattatattcaaaattttaatctgacgagccaacaggatgccgaagaagcattccttcat
ctactgtcctctttaagggacgaattttctgattcttatcttccaaaacatcattctctg
acagatgcatttgcatcccctaactgtagaattctgactcaagataggattgagatccag
agtgagcaagaaaggtggcagcagcacttcctcggaccatttgatggaattcttagtagc
attttaatgtgtcaaagttgttcgactgagatttcattgaattttcagttttttcatagc
ttgcctcttttgcctgtgcttgaaggtggtgccaccattagggttgggtgtagattggag
gattgtctcaggcagttcactgtttctgagcaagttgagaattacagctgcagccactgt
tggcacattgctgcaataaagtatttatctttaaggggagcaacagagacggagataaaa
agacttaagagttgtaatgagcaagactcgtgcacctgccatctccttgttcatctagaa
aatctaccatggtcaaataatttttctcgcactttaaagcaactaagcattgctcgtagt
cccaagattctttgcattcaattacaacgtgcttctataaatttttttggagaagtggtc
aaacttcagggccacatcagctttccattaactttgaacctgcttccattcatgatgaaa
gagatgcaatgtcaaaaaccaagctctcatctaaaccattttgatgtgcaatatgacacc
agaatgctgaacagcatttatgaaagaaatgcttcaaaattattatctgcaaatgcattt
agatcccctacacatacagaagctttcctgggacaatccaagataccacaaaccacggac
atctttagttcgcaagctaatgaaaaggtcagtgcagcttgtgaattagtcccttcagaa
cctcaggtatatcgtcttgtttctgtcgtggagcattttggaagagcttgtggtgggcat
tatactgtttacagaagtttgcaatcagaatcgcacgaggaacatcctgatgaaaattgc
aaaccttcccttgtgcactggttttgtatttcagactccaatgtgtatagggtttcagag
gaggatgttctagctgcagaagctagcttgctcttttatgagagaattgtagaaagctga
DBGET
integrated database retrieval system
