Populus alba (white poplar): 118049770
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Entry
118049770 CDS
T07314
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00906
Carotenoid biosynthesis
palz01100
Metabolic pathways
palz01110
Biosynthesis of secondary metabolites
Module
palz_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
118049770
Enzymes [BR:
palz01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
118049770
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GIDA
FAD_oxidored
Thi4
HI0933_like
GDI
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
118049770
NCBI-ProteinID:
XP_034915772
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Position
16:complement(6116885..6122341)
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AA seq
613 aa
AA seq
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MSLGFKNSLFFGQFNTVQLGSSKSRSQKHRILSIEPVRTSVLDGYIVPRNIKGKIDNLGK
VKLNKDFVLRSKSVLTVDKEVDVDGNGELGRERSNYDAIVIGSGIGGLVAATQLAVKGAK
VLVLEKYVIPGGSSGYYERDGYTFDVGSSVMFGFSDKGNLNLITRALAAVGCEMEVIPDP
TTVHFHLPNDLSVQVHREYIDFISELAAKFPHEKDGILKFYGECWKIFNALNSLELKSLE
EPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYMKDPQLLSFIDAECFIVSTVNALQTP
MINAAMVLCDRHFGGINYPVGGVGGIAKSLSKGLVDQGSEILYRANVTNIILEHGKAVGV
RLSDGREFFGKTIISNATRWDTFGKLLKGETLPKEEENFQKVYVKAPSFLSIHMGVKAEV
LPPDTDCHHFVLEDDWARLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIEDWEGL
STKDYEAKKKVVADEIISRLEKKLFPGIRSSIAFMEVGSPKTHRRYLARDKGTYGPMPRR
TPKGLLGMPFNTTAVDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGIEKRSPVLDA
ALLRLLGWLRTLA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagggttcaagaattccctattttttggccagttcaatactgtccagttaggg
agttccaaatccagaagccaaaaacataggattctgtctatagaacctgtccgaacctca
gttctcgatggttatattgtacccagaaacataaaaggcaaaattgacaatcttggtaaa
gtaaagttgaataaggactttgttttgaggtcaaagtcagtgttgactgtggataaagag
gtggatgttgatggaaatggagagttgggtagagagaggagcaattacgatgcaattgtt
attgggtctggtatcggtgggttggttgctgctacacagttggcagtgaagggagctaaa
gttttggtcttggagaagtatgtgattcctggtgggagttctgggtattatgagagggat
ggatatacttttgatgttggctcttctgttatgtttggtttcagtgataagggcaaccta
aatttgataacaagggcattggcagcagttggctgtgaaatggaggtgattcctgaccca
actactgtccattttcatctacccaatgacctttctgttcaagttcacagagagtacatc
gacttcatctcagaacttgctgctaaatttccccatgaaaaggatgggatccttaaattc
tacggtgaatgctggaagatattcaatgccttgaactctctggaactgaagtcacttgag
gagccaatctacctgtttggacaattttttcagaaacctcttgaatgcttgacactggct
tattaccttcctcaaaatgctggagatattgctcggaagtacatgaaggatcctcagtta
ttgtctttcattgatgcagagtgtttcatagtgagcacagtcaatgctttgcagactcca
atgatcaatgcggccatggtcctatgtgataggcattttggagggatcaattaccctgtt
ggtggggttggtggaattgcgaagtccttatcaaaaggtctggttgatcagggcagtgaa
atactttacagggcaaatgtgaccaacatcattcttgagcatggaaaggctgtaggagta
aggctttcagatggaagggagttctttggaaaaaccataatctcaaatgctactagatgg
gatacctttgggaagttgttaaaaggagaaacccttccaaaagaagaagaaaatttccaa
aaagtttatgttaaggctccatcttttctttccattcacatgggtgttaaagccgaggtt
ctaccaccagatacagattgccaccattttgtgcttgaggatgactgggcaagattagag
gagccttatggaagcatatttctaagcattccaactgttcttgattcgtcattggctcct
gaaggccatcatatacttcacatatttacaacatcttccattgaagactgggagggactc
tcgacaaaggactatgaggccaagaagaaggttgtggctgatgagattataagcagattg
gagaagaaactttttcccgggatcagatcatcaattgctttcatggaggtgggttcaccc
aagacgcacaggcggtacctggctcgtgataagggtacttatggaccaatgccacgcaga
actcctaaaggtttattgggaatgccattcaatacgacggctgtagatggtctttactgt
gttggcgatagctgctttccaggacagggcgtgatagctgtagctttttcaggagtaatg
tgtgctcatcgagtagctgctgatattggcattgagaaaaggtctcctgtactggatgct
gctctccttcggcttcttggctggttaaggaccttggcatga
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