Populus alba (white poplar): 118049818
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Entry
118049818 CDS
T07314
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118049818
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118049818
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
118049818
NCBI-ProteinID:
XP_034915827
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Position
1:complement(736653..738270)
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AA seq
382 aa
AA seq
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MAVFRFFVVLLSICILSFIPNACHGASKMNVIDQCWRMNPNWQRSRQHLATCSVGFAGKM
TNNVGKNVLWYKVTDPSDDPVNPRKGTLRYGATMITGKVWITFEKNMDIKLERPLLISSH
TAIDGRGVDVSIEGIGCLVVYKATDVIIHGLKIHHCKAQGPSSVMGPDGKLMPLGQMDGD
AIRLVTASKVWIDHNTLYSCQDGLLDVTRGSTSVTVSNNWFRDQDKVMLLGHDDGYLRDK
NMKVTVAFNHFGPNCNQRMPRVRHGYAHVANNLYLGWEQYAIGGSMNPSIKSESNHFIAP
AQSGKKEVTWRNTGMGAKGKPWNFYSVGDMFTNGASFVQTGRRGTAKPNYNKQQKFKVGS
ANSVQSMTSSAGALTCSRTLTC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcttcaggttctttgttgtacttctttccatttgcatcctttccttcatccct
aatgcttgtcatggggccagcaaaatgaatgtcattgatcaatgctggagaatgaatccg
aattggcagagaagccgacaacatctggctacttgctctgtggggtttgcagggaaaatg
accaacaatgttgggaaaaatgttttatggtataaggtcaccgatcctagtgacgaccct
gtgaatcccagaaaagggacattaagatatggagctaccatgatcacaggaaaagtctgg
atcacttttgagaagaacatggacattaaacttgagagacctcttcttattagcagccat
actgccattgatggtcgtggcgttgatgtcagcattgaaggcatcggatgcctcgtggtg
tacaaggcaaccgacgtgatcatccatggcctaaagattcaccattgcaaggcacaggga
cctagctcagtcatgggaccggatgggaaactaatgccgttaggtcagatggatggggat
gccataaggctggtcactgcatctaaggtttggatagaccacaatacattatactcgtgc
caggatggtcttcttgatgtcactcgtggatctacatctgttactgtctctaacaattgg
tttagagaccaagacaaggttatgcttcttggacatgatgatgggtatttgagagacaag
aacatgaaggtcacggttgcattcaatcattttggtcctaattgcaaccaaagaatgcca
agggttcgccatggatatgcacatgtagctaacaatctttacctgggatgggaacaatat
gcaattggaggaagcatgaatcctagcatcaagagtgaatccaaccattttattgcacct
gcacaatccggaaagaaggaggtaacttggagaaatacggggatgggtgcaaaaggcaag
ccctggaacttctactctgtaggggatatgtttacaaatggagcttcttttgtccaaacc
ggccgcagaggtacggcaaagcctaactacaataagcagcaaaagttcaaagttggaagt
gcaaactctgttcagtcaatgactagctcagcaggtgctttaacatgttcaagaacattg
acatgctga
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