Populus alba (white poplar): 118049899
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Entry
118049899 CDS
T07314
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118049899
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
palz01002
]
118049899
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118049899
Enzymes [BR:
palz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118049899
Peptidases and inhibitors [BR:
palz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118049899
Ubiquitin system [BR:
palz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118049899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH_2
MATH
UCH_1
ubiquitin
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
118049899
NCBI-ProteinID:
XP_034915955
LinkDB
All DBs
Position
16:5992597..6004236
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AA seq
1115 aa
AA seq
DB search
MTMMTPSPLDQEDEEMLVPHSDLVEGPQPMEVVAQVEQTSTVENQPVEDPPSMKFTWTIE
NFTRLNTKKHYSDIFIVGSYKWRVLIFPKGNNVDHLSMYLDVADSTALPYGWSRYAQFSL
AVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVIEAEVAVC
KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHISYFRKAVYHMPTTENDMPTGSI
PLALQSLFFKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLFEGHHMNYIECINVEYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE
NGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDVK
RALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRNFRIQK
QTQFSLFKEEVAKELGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREVSNKT
HNAELKLFLEVELGLDLCPIAPPEKTKEDILLFFKLYDPEKQELRYVGRLFVKNSSKPIE
ILAKLNQMAGFASEEEIELYEEIKFEPCVMCEHLDKRASFRTSQIEDGDIICFQKSPPEN
EEDCRNPDVPSYLEYVHNRQIVHFRSLEKAKEDDFCLELSKLHTYDDVVERVARQIGLDD
PSKIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKN
LKVAFHHATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHPNAELRLLEVFYHKIYKIF
PPNEKIENINDQYWTLRAEEIPEEEKKLGPQDRLIHIYHFTKESGQNQMQVQNFGEPFFL
AIHEGETLAEVKMRIQKKLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVFTRFQRRDVYGA
WEQYLGLEHSDNTPKRSYAVNQNRHTFEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccttcaccgttagaccaagaagacgaggagatgctcgtaccgcat
tcagatttagttgaaggtcctcagccaatggaagtagtggcacaagtggagcaaactagt
accgtggagaatcagcctgtggaggatcctccatcgatgaaatttacttggactattgag
aattttactaggttgaacacaaagaagcattattctgatatatttattgttggcagttac
aaatggagagtactgatattccctaaaggaaacaacgtggaccacctgtcgatgtatttg
gatgttgcggattcgacagctttgccatatggatggagtagatatgcgcaattcagtttg
gctgtggtcaatcaaattcataacaaatactcgattagaaaggacacacaacatcagttc
aatgcaagagagagtgactggggctttacatctttcatgcctctgagtgaactttatgat
cctagcagaggatacttagtgaatgatacagttgttattgaagctgaagttgctgtttgc
aaggttttagattattggtcctatgactcaaagaaggagacgggctatgtaggactgaaa
aaccaaggagcaacatgttacatgaactctctcctacaaactctataccatatttcctac
ttccgaaaggcggtgtaccacatgccaacaactgagaatgacatgcctacaggaagcatt
ccattggccctgcagagtttattctttaaacttcaatataatgataccagtgttgcaaca
aaggaactgaccaaatcttttggctgggatacgtatgattccttcatgcaacatgacgtg
caagagcttaacagggtcctgtgtgagaagctagaggataaaatgaaggggactgttgtg
gagggcactatacagcagttgtttgagggtcaccatatgaactacattgagtgcatcaat
gtggaatacaaatctacaagaaaggagtcattttatgatctccagcttgatgtgaaaggt
tgtcgagatgtttatgcttcttttgacaaatatgtggaagttgaacgacttgagggtgat
aacaaatatcatgctgaagaacatggtttgcaggatgcaaagaagggtgtcttatttatc
gacttcccccctgttcttcaactccaattaaagcggtttgaatatgattttatgcgcgat
actatggtgaagattaatgatcgctatgaatttcctcttcaacttgacctggacagggag
aatgggaaatatttatcacctgaagctgacaggagtgtgcgaaatctatacacacttcac
agtgttttggttcacagtggaggtgtgcatggtggacattattatgcttttatcaggcct
accctctctgatcaatggttcaaatttgatgatgaacgcgtgacaaaggaagatgtgaag
agggccttggaagaacagtatggtggtgaggaagagctacctcagaccaatcctggcttt
aacaatactccatttaaattcacaaaatactcaaatgcatacatgcttgtgtatatacgg
gaaagtgacaaggacaagataatttgtaatgttgatgagaaagacatcgctgaacacttg
aggataaggctgaagaaagaacaagaagaaaaggaagacaagagaagatataaagcacaa
gctcacctttacacaattataaaggttgcgcgagatgaggaccttaaagagcaaattgga
aaggatatttattttgatctcgtggatcatgacaaagtccgtaacttccgtattcagaaa
cagacgcagtttagtctgtttaaggaggaggttgctaaagagcttggtataccagtacaa
tttcagagattttggatatgggcaaagcgccagaaccacacatatagacccaatcggcca
ttgactccccaggaggaagcacaatcagttggacaactaagagaggtgtcaaataagaca
cataatgctgaattaaagttgttcttggaagttgagcttgggctggatttatgtcccatt
gctccacctgaaaaaactaaagaagatattctgcttttcttcaagctttatgaccctgaa
aaacaagaattacgatatgttggtaggctttttgtgaagaattctagtaaaccgatagaa
attctagcaaagcttaatcaaatggctggctttgcgtctgaggaagagattgaactttat
gaggaaatcaagtttgagccttgtgtcatgtgtgaacaccttgataagagagcctcattt
cgaacaagtcagattgaagatggggacataatatgctttcagaaatctcctcctgaaaat
gaagaagactgtcgaaatccagatgtgccttcatatttggaatatgtgcacaatcggcag
atagttcatttccgatctctagagaaggcaaaagaggatgatttttgtctagagttgtca
aaattacacacttatgatgatgttgtcgaaagagtagctcgccagattggtttggacgat
ccatccaaaatcaggttaacatcccacaactgctactctcagcagcctaagccacagcca
attaaatatagaggagtggagcatctatcagatatgttagttcactacaatcagacttcc
gatatcttgtattacgaagttctagatattcctctgccagagttgcaaggtctaaaaaat
ttgaaagttgctttccatcacgctaccaaagatgaagtggtaattcataacattagattg
cctaaacaaagcaccgtgggggatgtgattaatgaacttaaaactaaggtagaattgtct
cacccaaatgctgaacttcgactgcttgaagttttttatcacaagatttataagatcttt
ccacccaatgaaaaaattgagaatataaatgaccagtattggacgctgcgggcagaggag
attcccgaggaagaaaaaaagcttggtccccaagatcgcctgattcacatttatcacttc
acgaaagagtctggacagaatcaaatgcaagtacagaattttggtgaaccctttttcttg
gccatccatgaaggtgaaaccttagccgaagttaaaatgcgtatacaaaagaagctccag
gttcctgatgaggagtttgctaagtggaaatttgcatttctgtcactgggtcgtccagag
tacttgcaggattctgatgttgtgttcacccgctttcagagaagagatgtatacggtgct
tgggagcagtaccttgggttggagcactctgataacactcctaaaaggtcttatgcagta
aatcagaaccgtcacacgtttgagaagcctgttaaaatatacaattag
DBGET
integrated database retrieval system
