Populus alba (white poplar): 118049987
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Entry
118049987 CDS
T07314
Name
(RefSeq) CLIP-associated protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
palz03036
]
118049987
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
palz04812
]
118049987
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118049987
Cytoskeleton proteins [BR:
palz04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118049987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT_EZ
TOR1L1_N
HEAT_2
Vac14_Fab1_bd
Cnd1
PDS5
Adaptin_N
INTS1_R4
HEAT_Maestro
Tti2
UTP20
MMS19_C
HEAT_DAAF5
Dopey_N
Sec7-like_HUS
RRP12_HEAT
V-ATPase_H_N
IFRD
MMS19_N
Tra1_ring
Npa1
DUF7217
SEN1_N
Motif
Other DBs
NCBI-GeneID:
118049987
NCBI-ProteinID:
XP_034916072
LinkDB
All DBs
Position
2:14508936..14520296
Genome browser
AA seq
1443 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLSSSETTSLVDCCLDLLKDNNFKVSQG
ALQALASAAVLSGDYFKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWTHRSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLNDPNPGVREAAI
LCIEEMYSQAGPQFRDELHRHHLPNSMMKDINARLERIEPQVRPSDGLAGNFGAVEMKPT
SLHPKKSSPKAKSSTREISLFGAESDVTEKPIEPIKVYSEKELIREFEKIAATLVPEKDW
TIRIAAMQRVEGLVLGGATDYPCFRGLLKQFVGPLNTQLSDRRSSVVKQACHLLCFLSKD
LLGDFEACAEMFIPALFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRA
AVLRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFAKT
WPERSRRLFMSFDPVIQRIVNEEDGSLHRRHASPSIRDRSAQTSFTPQASAASHVPGYGT
SAIVAMDRTSSLSSGTSLSSGLLLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLE
LSDKQNPSALRSSSLDLGVDPPSSRDPPFPASVPASNHLTNSLTAESTASGIGKGSNRNG
GLVLSDIITQIQASKDSAKLSYRNNMAAESLPTFSSYSTKRISERGSVEEDNDVREPRRF
ANPHVDRQYIDTPYKDLNYRDSHGSHIPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGE
VSSYVEGPASLIDALSEGLSPSSDWNARVAAFNYLHSLLQQGPKGVQEVIQNFEKVMKLF
FQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTL
EIVSKTYGVDILLPALLRSLDEQRSPKAKLAVIEFALSSFNKHAMNSEGSGNTGILKLWL
AKLTPLVHDKNTKLKEAAITCIISVYSHFDSIAVLNFILSLSVEEQNSLRRALKQYTPRI
EVDLMNFVQSKKERQRSKSLYDPSDVVGTSSEEGYIGASKKSHYFGRYSGGSVDSDSGRK
WSSTQESTLISGSIGQAAPDETQENLYQNFETSSNTDAYSSKNRDLNYVAGSTGLNLGSR
PGRLENMDNGLNFEGLLTPGMDINGLMSSEPLRAAEGYGHDNNVLSELDLNNHKPAAVKI
NSLADTGPSIPQILNLICNGNDESPTSSKRGALQQLIEASMANDPSVWSKYFNQILTAVL
EVLDDSDSSIRELALSLIVEMLKNQKDAMEDSIEIAIEKLLHVTEDIVPKVSNEAEHCLT
VALSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMVQLPSFLPALFEA
FGNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTAIDA
SHD
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctggaactggcgcgcgcgaaggacacgaaggagaggatggcaggagtc
gagaggctacaccaacttcttgaagcttctagaaagagtttgagttcgtccgaaacgacg
tctcttgtcgattgctgcttggatcttttgaaagacaacaatttcaaggtttctcaaggt
gctttacaggcgttggcttctgctgctgttttgtctggtgactactttaagttgcatttc
aatgcgcttgttcctgctgttgttgaacgcctaggtgacggtaaacagcccgttcgtgac
gccgctcgacgcctcttgctcactctcatggaggtttcttcgcctacaatcattgttgag
agagctggctcgtttgcctggacgcacagaagctggagagttcgtgaagagtttgctcga
acagtaacatctgcaattagtctttttgcatccactgagcttcctcttcagcgggctatt
ctacctcctattttgcagatgttgaatgacccgaatcctggtgttagggaagcagctata
ttatgcatcgaggagatgtactcacaggccgggccccaattccgtgacgagcttcatcgc
catcatcttcctaattccatgatgaaggatatcaatgccagactagagaggattgaacca
caagtacgcccttcagatggacttgccggtaactttggtgctgttgagatgaagcccaca
agccttcatcccaagaaaagcagtccaaaagccaaaagttccacgagggagatatctctt
tttggagcggagagtgatgtcacagagaaacccatagagccaattaaagtttattcagaa
aaggagctaattagggaatttgagaagattgcagctacccttgttccagaaaaggattgg
actatccgcatagctgccatgcagagagttgaaggccttgttttgggaggtgctactgat
tacccatgttttcgggggcttctgaagcaatttgttggccctctaaacacacagttatct
gatcgaaggtctagcgtagtgaagcaggcttgccatctattatgctttttatcgaaggat
ctgttgggagattttgaggcatgtgctgagatgttcattcctgcccttttcaagctcgtt
gtgattactgtacttgtcattgcagaatctgcagataactgcataaaaacgatgttgcgt
aactgtaaagttgctcgtgtgcttcctcgcatagctgattgtgcaaagaatgaccgcgct
gcagtactccgtgcaagatgctgcgaatatgcactattgatacttgaacattggcccgat
gctcctgaaatacagcgatctgctgatctctatgaagatctgataagatgttgtgttgca
gacgcaatgagcgaggtgcgctcaactgcaaggatgtgctacagaatgtttgcaaaaact
tggccagagcgttcccgtcgtttatttatgtcctttgatcctgttattcaacggattgtt
aatgaagaggatggaagcttgcacaggagacatgcatctccttccatccgtgatagaagt
gcgcaaacatcatttacccctcaggcatctgcggcttcacatgtacctggatatggaact
tctgctattgttgcaatggatagaacttcaagtttatcctctgggacatctctgtcttct
ggtcttttgctctcacaagcaaagtcccttggtaaaggtactgaacgtagtctggaaagt
gtgttgcacgctagtaagcagaaggtcactgcaattgaaagcatgcttagaggtttggaa
ttgtccgacaaacaaaatccttcagctctccgttcatcaagtttggatctaggagttgac
cctccatcatctcgtgatccaccattccctgcttctgttccagcctctaatcatctcaca
aactctttgacagcagaatcaactgcttctggtattggtaaaggcagtaaccgcaatggt
ggcttggtcttgtctgatattattacccaaattcaagcttccaaagattctgctaagcta
tcatatcggaataatatggcagccgagtctttgccaacattttcatcatattcaacaaag
aggatttctgaaagaggttcagttgaagaggacaatgatgttagggaacctaggcgattt
gcgaacccacatgtagacaggcagtatatagacacgccttacaaagatttaaactacaga
gattcacatggcagtcacatccccaacttccagagaccacttttgagaaagcatgtggct
ggacgaatgtctgcgggcaggcgaaagagttttgatgatagtcaactctcacttggagag
gtgtcaagttatgtagaaggtccagcatctctcatcgacgcattgagcgagggacttagt
ccaagttctgactggaatgctagggttgctgctttcaattacctccattctttgctgcag
caaggcccgaaaggcgttcaagaagtaattcagaattttgagaaggtaatgaagttgttt
ttccagcatctggatgatccgcatcataaagttgcacaagcagctctctcgacacttgca
gatattattccatcttgcagaaagccatttgagagttacatggaacggatcttaccacat
gttttctcccgactaattgaccccaaggagctagtcaggcaaccttgctccacaactttg
gaaattgtcagcaaaacttatggggttgatattcttttaccagcattgctccgttcacta
gatgagcagaggtcaccaaaagccaaattggctgttattgagtttgccctcagttcattt
aacaagcatgcgatgaactctgaaggctctgggaatactggcattttgaagttatggctt
gctaagctgacaccgttagtacatgataaaaatactaagctcaaggaagctgctattact
tgcatcatatcagtctattcacactttgattccatagctgttctcaatttcattcttagt
ttatcggttgaagaacaaaattccttgcgacgagcccttaaacagtacactcctcgcatt
gaagtggacctaatgaactttgtgcagagcaagaaagagcgacagagatctaagtccttg
tacgacccatctgatgttgttggaacatcatcagaagaaggatatattggtgcatcaaag
aagagtcactattttggaaggtattctggtggttctgttgatagtgatagtggcaggaag
tggagttctacccaagaatcaaccctgatatcgggaagtattggccaagcagctcctgat
gaaactcaggagaacttgtatcagaattttgagactagttctaatactgatgcctatagt
tcaaaaaatagggatttgaattatgtggctggttctactggtctgaacttgggatcccga
cctggccggctggaaaacatggacaatggccttaactttgaagggctgttgaccccaggt
atggacattaatggattgatgagttctgaacctctgcgtgctgctgaaggctatgggcat
gacaataatgttctttctgagttggaccttaataatcataaacctgcagctgtgaagatt
aattctttggctgacactggtcctagcattcctcaaattcttaatctgatatgcaatggt
aatgatgaaagccctacctcaagtaagcgtggtgcacttcagcagttaattgaagcttct
atggctaacgatccctctgtttggtccaaatacttcaatcaaattttaacggctgtactg
gaggtgttggatgattctgattcatcaatccgagaacttgctctttcattgattgtggaa
atgctaaaaaatcagaaagatgccatggaagattctattgagattgctattgagaagctg
cttcatgttacagaggatattgttccaaaagtttccaatgaagctgagcactgcttgact
gttgcattgtctcagtatgatccattcagatgcttaagtgtaattgtccctttactggtt
actgaagatgagaaaactcttgtaacctgcataaactgtttaactaagcttgtgggtcgt
ctttcacaagaggaactgatggtccagttaccatcatttttgcctgcactttttgaagct
tttggaaaccagagtgctgatgttcgcaagactgtggttttctgtctggtggatatatat
atcatgcttggaaaagcatttttgccgcacttggaagggcttaacagtacacagctgcgt
ttggtgaccatttatgctaatcggatatcacaggcaagaacaggtactgcaatagatgct
agccatgattag
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integrated database retrieval system
