Populus alba (white poplar): 118050057
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Entry
118050057 CDS
T07314
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
palz
Populus alba (white poplar)
Pathway
palz00040
Pentose and glucuronate interconversions
palz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
118050057
Enzymes [BR:
palz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
118050057
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
118050057
NCBI-ProteinID:
XP_034916175
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Position
2:complement(15562138..15567042)
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AA seq
442 aa
AA seq
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MEVSLRSFCVRTMLVLVVFISVNAAEEKDEQKLRLKETQELLSSKNSSMADWYDDAWSEH
TMEDPEEVAAMVDESIRNSTERRKLGFFSCVTGNPIDDCWRCDPHWQLHRKRLANCGIGF
GRNAVGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDEPLWIVFKRDMVITLKQELIMN
SFKTIDARGTNVHIANGACITIQFITNVIIHGLHVHDCKPTGNAMVRSSPSHYGWRTIAD
GDGISIFGSSHIWIDHNSLSNCADGLIDAIIGSTAITISNNYFTHHNEVMLLGHSDSYQR
DKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYL
APANAFAKEVTKRVDTDAGVWKNWNWRSEGDLLLNGAYFTASGAGAAASYARASSLGAKS
SSMVGDITSNAGALSCRRGRRC
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaggtttcgctgagaagcttttgtgtacggacaatgctggttctggttgtgtttatt
agtgtaaacgctgcggaggagaaagacgagcaaaaattgaggttgaaggaaacgcaagag
ttgttgagctcaaagaactcgtcaatggcagactggtatgatgatgcatggagcgagcat
actatggaggatccggaggaagttgcggcaatggttgacgagagcatacgcaacagcaca
gaaaggaggaaattgggatttttctcatgcgtaaccggcaatcctattgatgattgttgg
cgatgtgatccccattggcaactccacagaaagcgccttgctaactgtggcattggtttt
ggacgcaatgccgtaggtggtcgcgatggaagatactatgttgttagtgaccctggcgat
gatgatgctgttaacccaaaaccaggcacacttcgccatgctgtcattcaagacgagcct
ttgtggattgtgttcaagagggacatggtgattaccctcaagcaagagctcatcatgaac
agcttcaagaccatcgatgctcgtggaaccaatgttcacatagccaacggggcttgcatc
accatccagttcatcacaaacgtcataattcacggtctccacgtccatgattgtaagccc
acagggaacgcaatggttcgtagctcgcctagccattatgggtggagaacaatcgctgac
ggagatggcatttccatttttggatcaagccacatttggattgatcacaattctctttca
aattgcgctgatggcctcattgacgctattatagggtcaacagccattaccatttcgaac
aactatttcactcaccataacgaggttatgctactgggccatagtgactcctaccaaaga
gataagcagatgcaagtgaccattgcctacaaccattttggcgagggtcttatccagagg
atgccgaggtgcaggcatgggtatttccatgtagtgaacaatgactacacccactgggaa
atgtatgccattggaggaagtgctgagcccaccattaacagccagggcaacagatatctt
gcccctgccaacgcttttgccaaagaggtgacaaaaagggtggacacggatgctggagta
tggaagaattggaattggagatcagagggagacctgctgctaaatggagcctacttcact
gcatcaggagccggagctgcagccagctatgccagggcctcaagcttaggggcaaagtcc
tcatcgatggtcggggacattacttcaaacgccggtgccctttcctgccgcagaggccgc
cggtgttga
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