KEGG   Populus alba (white poplar): 118050179
Entry
118050179         CDS       T07314                                 
Name
(RefSeq) protein RRC1
  KO
K12842  U2-associated protein SR140
Organism
palz  Populus alba (white poplar)
Pathway
palz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:palz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118050179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:palz03041]
    118050179
Spliceosome [BR:palz03041]
 Complex A
  U2 snRNP components
   U2 related factors
    118050179
 Complex B
    118050179
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 SAP
Other DBs
NCBI-GeneID: 118050179
NCBI-ProteinID: XP_034916320
LinkDB
Position
6:23654150..23661862
AA seq 1052 aa
MAQYPSLKKPIKFTHPLYRDKLFYLIQSTALTSTRRAENVPDEPQISLHKNLNSFADSTR
SDQLSSALIEFNAKMSSFSITRKKTPFQKHREEEEAKKKRAEDETARLYAEFVESFQGDN
APGSKTFVRGGTINPNEKLKSDAEGEKSKDGVSVPKKGSRYVPSFIPPPMASKGKEPERK
REEERPKEKEKGKARNIDHFMEELKHEHEMRERRNQEREHWREGRHPESSAPSSRFDELP
DDFDPSGKLPGSFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWPRTEEE
RRRQRNCGFVAFMNRADGQAAKDEMQGVIVYEYELKIGWGKSVALPSQALPAPPPGQMAI
RSKEGATVILSGPSGPPVTSVPNQNSELVLTPNVPDIMVAPPEDDHLRHVMDTMALNVLD
GGCAFEQAIMQRGRGNPLFNFLFELGSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGS
GRWVPPSLPTAKSPEHGKESGSTHAAGRSRRVDPERTLTDPQRDEFEDMLRALTLERSQI
KDAMGFALDNVDAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSSAPVKNASAYR
TKFEAALPDIMESFNDLYRSITGRITAEALKERVLKVLQVWSDWFLFSDAYVNGLRATFL
RSSNSGVIPFHSICGDAPEIEKKNSTEDTVDGGKTNQDAALAMGKGAATKELMDLPLAEL
ERRCRHNGLSLVGGRETMVARLLNLEEAEKQRGYDLDDDLKIAQSNSSSSRYPSVHREVN
VDPGPVGSTGWNIYGEDDTPSQNRRSVSLVSTLPIPQPELKAFAKKEKNDPVLPASKWAR
DDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFATDASIPTQPESGMNEEQRQ
KLRRLEVALIEYRESLEEQGMKKSEEIERKVAVHRKRLESEYGLSSSNEDGTGNKRISSE
RRDRRDDNHESSRKRHRSESRSESPQRKLSLRDRERGHDSDKDRERHRERDRGNNLESER
RDRDYREKSGSKERDDHDRDRGRDRDRRRRVK
NT seq 3159 nt   +upstreamnt  +downstreamnt
atggctcagtacccttccttaaaaaagcccataaaattcacccaccctctctatcgagac
aaattgttttacttgattcaatcaacagctctaacatcaacaagaagagccgagaacgtc
cctgacgagccccaaatctccctccacaaaaaccttaattcttttgctgattcaactcgc
tcggatcagctcagctcagcactaatcgaatttaatgcaaagatgagttctttctccatt
acgagaaaaaagacaccgttccagaagcatagagaggaagaagaggcaaagaaaaagaga
gcggaggatgaaacagctcgattgtatgcagagtttgtggagtcatttcaaggggataat
gcacctggatcgaagacttttgttcgaggtggaacaatcaatcccaatgagaaattgaag
agtgatgctgaaggtgaaaagtccaaagatggggtatctgttccaaagaagggaagtagg
tatgttccatcttttataccacctcctatggcatccaaaggaaaagaacctgagaggaag
agggaggaggaaagacctaaggagaaggaaaagggaaaggctcgaaacatagatcatttt
atggaggagctgaagcatgagcatgagatgagggagaggcgaaatcaagaacgggaacat
tggcgtgaaggacgtcatcctgaaagttctgctccatctagtcgatttgatgaactacct
gatgactttgatccaagtggaaagctgcctggatcatttgatgatggtgatccacaaact
acaaatctttatgttgggaatctctcaccacaggttgatgagaattttcttctgcggact
tttggaagatttgggcctattgctagtgtgaagataatgtggcctaggacagaggaggag
cggaggcggcaaagaaactgtggattcgtagcattcatgaatagagctgatgggcaggct
gcaaaggatgaaatgcaaggagttattgtgtatgaatatgagttgaaaattgggtggggt
aaatctgtggcccttccatcgcaggcattaccagctccaccaccaggacaaatggctatc
agaagtaaagagggtgcaactgtgattctctctggtccatcaggcccaccggtcacgtct
gtcccaaatcagaactctgaactggttcttactccaaatgttcctgatataatggttgct
ccacccgaggatgatcatctccgtcatgtgatggatacaatggctctaaatgttttggac
ggaggatgtgcttttgaacaagctatcatgcagaggggtcgagggaatcctcttttcaac
ttcttgttcgagcttggctcgaaggaacatacttattatgtttggaggctctattctttt
gctcagggtgatactcttcaaaggtggcgaactgagccttttatcatgataactggtagt
ggaagatgggtaccaccatctctgcccacagcaaagagtccagagcacgggaaggagtct
ggtagcacacatgctgctggaagaagcaggcgtgttgaccctgaaagaacactgactgat
ccacaaagggatgagtttgaggatatgttgcgtgctttaacattggaaagaagtcaaata
aaggatgctatgggttttgccctggataatgttgatgctgcaggggaggtagttgaagtt
ctgacagaatctttgacacttaaagaaactcctattccaacgaaagttgcaagactcatg
cttgtctctgatatccttcataatagtagtgctcctgtaaaaaatgcatctgcttatcgc
actaaatttgaagctgctctgcctgatataatggagagctttaatgacttgtatcgtagt
ataactggaaggatcactgctgaggcccttaaggaacgagttctgaaagtgttgcaagta
tggtcggattggtttctgttttcagatgcttatgtgaatggactacgtgctacttttctt
cgttctagtaactctggtgtgatcccatttcattctatatgtggcgatgcacctgaaatt
gagaaaaagaatagcacagaagacacagttgatgggggaaagaccaatcaagatgctgca
ttggcaatgggcaaaggagctgctacgaaggagctaatggatcttccccttgctgagctg
gaaagacgttgcagacataatggattgtcgcttgttggtggtagagaaacgatggtggca
cgattgctgaacctggaagaggcagaaaaacaaagggggtatgatttagatgatgacttg
aaaattgctcagagcaattcaagttccagtagatatccaagtgttcacagagaagtgaat
gttgatccagggccagtgggatcgacagggtggaacatttatggagaggatgatacgcca
tcccagaacagaaggtccgtgtctttggtttcaaccctcccaattccacaacctgaacta
aaagcctttgcaaagaaagagaagaatgatcctgttctgccagcatctaaatgggctaga
gatgatgatgaaagtgatgacgaacaaaagagaagtgtcagggaccttgggttaagctac
tcatcttctggaagtgaaaatgctggtgatggtcagggtaaggaagatgaaatggaattt
gctactgacgcaagcatcccaacacaacctgagagtggaatgaatgaagagcagagacaa
aagttgagacgtttggaagtcgctttaatagagtatcgtgaatccctcgaggagcaagga
atgaaaaaatcagaggaaattgagaggaaagttgcagtacatcggaaacggctagagtca
gaatatggcttatcaagttcaaatgaagatggcactggcaacaagagaatatcttctgaa
aggagggatagacgtgacgataaccatgaatcctcaagaaagcgacaccgcagtgaaagc
agaagcgaaagcccacaaagaaaactatcacttagggacagagagaggggacatgactca
gacaaggaccgggaaaggcatagggaaagagacaggggtaataatttggaaagtgaaaga
cgggaccgcgattaccgagaaaagagtggaagcaaagagcgggatgatcatgacagagac
agaggcagagacagggataggaggagacgtgtaaaatga

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