Populus alba (white poplar): 118050276
Help
Entry
118050276 CDS
T07314
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
palz
Populus alba (white poplar)
Pathway
palz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118050276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
palz04121
]
118050276
Enzymes [BR:
palz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118050276
Ubiquitin system [BR:
palz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
118050276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118050276
NCBI-ProteinID:
XP_034916471
LinkDB
All DBs
Position
16:complement(5629192..5634117)
Genome browser
AA seq
304 aa
AA seq
DB search
MAPGGSAFKEVLELVAECDIATPKSENNIAPTKGTVILSGKHGVYSNNGVHELLECPVCT
NLMYPPIHQCPNGHTLCSACKLRVHNCCPTCRYDLGNIRCLALEKVAESLELPCKYQSLG
CLDVFPYYSKLKHEQHCRFRPFSCPYAGSECSVTGDIPALAAHLKDDHKVDVHDGCTFNH
RYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDDNEAKKFSY
SLEVGGNGRKLVWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFSGGDRKELKLRVTGRV
WKEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgggggcagtgcttttaaagaagttcttgaattagttgcagaatgtgacatt
gcaacgccaaaatcagaaaataacattgcacctacaaaaggtactgttattctgagtgga
aagcacggggtttattcaaacaatggtgtccatgaactccttgagtgtcctgtctgtaca
aatttaatgtatcctccaattcaccagtgcccaaatggacacactctatgttcagcctgc
aagcttagagtacataactgttgccctacttgccgctatgatcttggaaatatacggtgc
ttggctttggagaaagttgcagaatcattggagctgccctgcaaataccagagtttagga
tgtcttgatgttttcccatactacagcaagctcaagcatgagcaacactgtcgatttcgt
ccatttagctgcccttatgctgggtctgagtgctctgtcactggtgacatccctgccctt
gctgcccatctcaaggatgatcacaaggttgatgtgcatgatgggtgtaccttcaatcat
cgttatgtcaaatcaaatccacatgaagttgaaaatgccacatggatgcttactgtattt
aactgttttggaagacagttctgcttgcattttgaggctttccaactgggcatggcacct
gtctatatggccttcttaaggtttatgggtgatgataatgaagcaaagaaattcagttac
agcttagaagttggcggcaatggccgaaaactggtatggcaaggaattcccaggagcatc
cgtgatagtcacaggaaagttcgcgatagccaggatgggcttattattcaaaggaatttg
gctctctacttctctggtggggataggaaagagctgaagttgagggttactggtcgtgta
tggaaagaagaatga
DBGET
integrated database retrieval system
