Populus alba (white poplar): 118050542 Help Entry 118050542         CDS       T07314                                  Name (RefSeq) THO complex subunit 6 isoform X1   KO K13175   THO complex subunit 6 Organism palz  Populus alba (white poplar) Pathway palz03013   Nucleocytoplasmic transport palz03040   Spliceosome Brite KEGG Orthology (KO) [BR:palz00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     118050542   09122 Translation    03013 Nucleocytoplasmic transport     118050542  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:palz03019]     118050542    03041 Spliceosome [BR:palz03041]     118050542 Messenger RNA biogenesis [BR:palz03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      118050542 Spliceosome [BR:palz03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     118050542 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR41 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Ge1_WD40 DSE1_N Beta-prop_NOL10_N Hira Beta-prop_WDR90_POC16_2nd Beta-prop_Nup120_160 Motif Other DBs NCBI-GeneID:  118050542 NCBI-ProteinID:  XP_034916818 LinkDB All DBs Position 7:2186102..2191387 Genome browser AA seq 365 aa AA seqDB search MFGDAANWNEDAYKESILKDREIQTLTVFRTAWPPSSNPNPNTIVLASSDGSLTSYSISE IPLGFSDSRAPQVKPNAFLQGHDGPAYDVKFYGNAEEDALLLSCGDDGRIRGWRWEEFMQ SQVPVALQGNHIEPIVDMVNPQHKGPWGALSPIPENNAIAVDTQGGSIFSAAGDSCAYCW DVETCKIKMCFKGHLDYLYCIVARNSANQIITGSEDGSARLWDCRSGKCIQVIDSVKDEK FKGFSSPVSCVALDASESWLACGSGRSLSVWNLPASECVSRMCTRASIQDVIFSDNQILA VGAEPVMSRFDINGAVLSQIPSAPQSAFSVSVHPSGVTAVGGYGGLVDIISQFGSHYRTF HCQCV NT seq 1098 nt NT seq  +upstreamnt  +downstreamnt atgtttggagacgcagcgaactggaatgaggatgcatacaaagagagcattctaaaagat cgagaaatccaaaccctaactgtctttagaactgcgtggccaccatcttcaaaccctaac cccaacactatcgtcctcgcctccagcgacggctcactcacctcttactccatctccgaa attccattgggttttagtgattcaagggcaccacaggttaaacctaatgcattccttcaa ggacatgacggacctgcctatgatgtcaaattttatggcaatgctgaagaagatgctttg ttactgagctgtggtgatgatggtcgaattcgaggatggaggtgggaggaatttatgcaa tctcaggtgcctgttgctttgcaaggaaatcacatagagccgatagttgatatggtgaat ccccagcacaagggtccttggggtgctctatccccaattccagaaaacaatgccattgca gtggatacccaggggggttccattttctcagctgccggggattcttgtgcatattgttgg gatgtggaaacttgtaagatcaaaatgtgttttaagggacacttggactacttgtattgt atagttgctcgtaactccgctaatcagatcataactggttcagaggatggttctgcaaga ctttgggattgcagaagtggaaagtgtatccaggtaattgattcagtgaaggatgagaag ttcaaaggattttcctcacctgtcagctgtgttgctcttgatgcaagtgagagctggttg gcttgtggcagtggtcggagtttatcggtctggaatcttcctgcttctgaatgtgtttca aggatgtgcactcgtgcatccatacaggatgtaatatttagtgacaatcaaattctagct gtcggagcagagcctgtaatgagtcgttttgacataaatggggcagttctttctcaaata ccatctgctcctcaatcagcattctctgtttctgtacacccatcaggggtgactgcagtt ggaggttatggaggtcttgtagatatcatctctcagttcggaagccactatcgcactttc cactgccaatgcgtctga

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