Populus alba (white poplar): 118050630
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Entry
118050630 CDS
T07314
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 3
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118050630
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118050630
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
palz03021
]
118050630
03019 Messenger RNA biogenesis [BR:
palz03019
]
118050630
03041 Spliceosome [BR:
palz03041
]
118050630
Enzymes [BR:
palz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
118050630
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
118050630
Transcription machinery [BR:
palz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118050630
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118050630
Spliceosome [BR:
palz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118050630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
118050630
NCBI-ProteinID:
XP_034916913
LinkDB
All DBs
Position
19:7205952..7212245
Genome browser
AA seq
336 aa
AA seq
DB search
MEQAVLDDIIERLLEVRGKPGKQVQLSESEIRQLCVESREIFLRQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGFPPDANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRIWKAFIDCFNCLPVAARIDEKILCMHGGLSPELNNLE
QIRNLQRPTDVPDSGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGPDKVAEFLQKQDLDLI
CRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKSK
FKPGNTSTGVGVFGSTITAKPGNPPPGVKSFLGPNV
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagcagttcttgatgatataatcgagaggttattagaggttagagggaaacct
gggaagcaagttcagttatcagagtccgagatccggcaactatgtgtggagtctagagag
attttcttgcgccagcctaatttgttggagcttgaagcacccatcaagatttgtggtgat
atccatggtcaatattctgatcttctaaggctatttgaatatggtggtttccctccagat
gcaaactacttatttttgggggactatgtggatcgaggcaagcaaagcctggagacaata
tgtcttctccttgcttataagataaaatatccagaaaactttttcctcttgaggggaaac
catgaatgtgcttcaataaaccgcatatatggtttttacgatgagtgtaagagaaggttt
aatgttaggatatggaaggcatttattgattgttttaattgcctacctgtggctgcacga
attgatgagaagattctctgcatgcatggtggattgtctccagagctaaataatttggaa
cagattcgaaacttacagcgcccaactgatgtaccagactcaggtttactctgtgatctt
ctctggtcggatcctagtaaagatgttcagggttgggggatgaatgacaggggagtttca
tacacatttggtcctgacaaggtggcagagtttcttcagaagcaggatttggatctcatt
tgccgtgcccaccaggttgtggaggatggatatgagttctttgccaaccgacaacttgta
actatattttcagcgcctaattactgtggggagtttgataatgctggtgctatgatgagt
gtggatgagactttaatgtgctctttccaaatattaaagcctgctgaaaagaaatcaaag
tttaagcctggaaacacttcaaccggagtaggtgtttttgggagcaccattacagccaag
cctggaaaccctccaccaggagtcaagtccttccttggcccaaacgtatga
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