KEGG   Populus alba (white poplar): 118050645
Entry
118050645         CDS       T07314                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
palz  Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:palz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:palz01009]
    118050645
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:palz03036]
    118050645
Enzymes [BR:palz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     118050645
Protein phosphatases and associated proteins [BR:palz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     118050645
Chromosome and associated proteins [BR:palz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118050645
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 118050645
NCBI-ProteinID: XP_034916934
LinkDB
Position
19:complement(7302605..7313960)
AA seq 1270 aa
MMGTELIRVRVKEENDDIPSVPPGFESFAAFNFNRVQDGEKQESNVISCSATASASESLP
VKMETGFEDEAKVTRSLRRRPWIKYGHLDGFSEDESDSAKLNQNLSSRSQLPKGVIRGCP
QCSNCQKVSARWRPEYARKPDIEDAPVFYPTEEEFEDTLKYIASIRPKAEQYGICRIVPP
PSWKPPCPLKEETVWKGSTFATRVQRVDKLQNRDSMRKMSTMSNHTRKKRRRCMRMAIDC
GADIGSISRSNDTGVCEAESFGFEPGPLFTLDKFQKYADDFMAQYFRKDENTINKGGSMT
MLQENREPTLDSIEGEYWRIVEKATEEIEVLYGADLETGVFGSGFPKTSSEVGSATNDRY
TKSGWNLNNFPRLPGSVLSFESGDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWG
AQKIWYGVPGKDAVKLEEAMRMYLPDLFEEQPDLLHKLVTQLSPNILKSIGVPVYRCVQN
SGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQTAIELYREQGRRTSISHDKLLL
GAAREAVRAHWELNLLKRNKLNNLRWKDMCGKDGILAKAFKERVETEHVRRQFLCNSSPA
LKMESDFDATSERECSVCLFDLHLSAVGCHCSPDKYTCLNHAKQLCSCVSGARFFLFRYD
ISELNILVEALEGKLSAVYRWARLDLGLALTSFVSKDNAEEGKLSCSPKRTATEQVRSHA
SVDLHKVSPGRIISGDFRLNSAGICWQIATEEEKKPPEDIPSKDARASAVSHSSFQVIEK
ENDNFKLNQKGSSLLSTNLRTLACQLSQEDPSYTAGLASEKCERKKPSTLCNDNIILLSD
DEGDELKPISERAKENVSVNHSSLSEKLSISHDRSCNDNKDSILTFAVINGAVKSEKNVS
LFLFPDENNSPSGPLQVKDGYNQDGGKVLGFNQSNGFCHAGPSTAGFGRNIQNFSSNRDA
GKDNRMANAGSQQPQPCGSGKPNIEDEMGANATSTSVDNSRIMAGSPSSSQNNLDRYYRQ
KGPRIAKVVRRINCNVEPLEFGVVLSGKSWCNNQAIFPKGFRSRVRYLSVLDPTSMCYYV
SEILDAGRNSPLFMVSLEHYPNEVFIHVSAARCWEMVRERVNQEITKQHKTGRTNLPPLQ
PPGSLDGFEMFGFSSPAIVQAVEALDRNRVCTDYWDSRPYSRPQGQIPQHSQSKANARHS
QGTSEDQNNRKVPGSQFLPAEVDTTLGGLFKKASPEELILLSRVLSDNKPTANPGLITQL
LNEEIHNRPR
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgatgggaactgaactcattagagttcgtgttaaggaggagaatgatgatatcccatca
gttccacctggttttgagtcatttgcagctttcaactttaacagggtgcaagatggtgaa
aaacaagaaagtaatgtaatcagttgttcagccactgcgagcgcttctgaatcattgcca
gtcaagatggagacggggtttgaggatgaagcaaaagttacaaggtccctccggcgtaga
ccctggataaagtatggacatttggatggtttttcagaggacgagtctgattctgcaaag
cttaatcaaaatctctcctcgaggtctcaacttcccaagggagtgatccgtggatgtcca
caatgcagtaattgccaaaaggtcagtgcaagatggcgaccagaatatgctcgcaagcct
gacattgaggatgctcctgtattctaccccactgaagaggagtttgaagatacattgaaa
tatattgctagtatacggcctaaagctgaacaatatggaatctgtcgcattgttcctcct
ccttcttggaaacctccatgtcctcttaaggaagaaactgtttggaagggctctacattt
gcaactcgtgtccagagggttgacaaactgcagaaccgggattctatgagaaagatgtca
acgatgtctaaccataccaggaagaaaaggagaagatgcatgaggatggcaatagattgt
ggggcagatattggaagtatctcaaggtctaatgatactggagtttgtgaagctgagagt
tttgggtttgaacctggtcctctgtttactttggataaatttcagaaatatgctgatgat
ttcatggcccagtacttcaggaaggatgagaatactattaataaaggaggcagcatgaca
atgcttcaggagaaccgcgaaccaacattggatagtattgagggtgaatattggcgaatt
gtagagaaagcaactgaagaaattgaggtcctatatggagctgatctggaaacaggggtt
tttggcagtggatttccaaaaacatccagtgaagttggttctgctaccaatgatcgttat
acaaaatcaggctggaacttgaataactttccgaggcttcctggatctgttctttccttt
gaaagtggtgatatatctggtgttttggtgccatggctgtatatagggatgtgcttctcc
tccttctgttggcatgttgaagatcatcacctatattcactgaattacatgcattggggc
gcgcaaaaaatatggtatggtgtccccgggaaggatgctgttaaattggaagaggcaatg
agaatgtatttacccgatctgtttgaagaacaacctgatttgctccataagctggtgact
cagctctcccccaacatactaaaatccataggagtgcctgtctatcggtgtgttcagaat
tctggagaatttgtgctaacctttcctcgagcatatcattcggggtttaattgcggtttc
aattgtgcggaggcagtgaatgtagctcctgttgactggttgccccatggacagactgct
atagagctataccgtgagcagggacggaggacttccatctcccatgataaattgttgctt
ggggcagcaagggaagcagtgagagcacattgggaactgaatttacttaagaggaataaa
ttgaataacttaagatggaaagacatgtgtggaaaagatgggatattagcaaaagcattc
aaggaacgtgtggagacagagcatgtgaggagacaatttctctgcaactcttccccagca
ttgaagatggagagtgattttgatgccacaagtgagagggaatgcagtgtttgtcttttt
gatttgcacctgtctgcagtggggtgtcattgttctccagacaagtatacatgcctgaat
catgcaaagcagctgtgttcatgtgtttcgggtgccagatttttcctgtttcgctatgac
attagtgaattaaatatccttgtggaggctttggaaggaaaattgagtgcagtgtaccga
tgggcaagactggatcttggacttgccctgacttcttttgtttccaaagacaatgctgaa
gaaggtaaattatcatgttctccaaaaagaactgcaactgaacaggtgagatcacatgcg
tcagtagatctccataaagtttcaccagggagaataatatctggtgacttcagattgaat
tcagctgggatctgttggcagatcgccacagaagaagagaagaaaccacctgaagatata
ccttcaaaagatgcaagggcatcagctgtatctcatagttcttttcaagtaattgagaag
gaaaatgacaatttcaagctaaaccagaaaggttctagtcttttgtctacaaatttaagg
acactagcttgccagttgtctcaagaagacccatcctatactgcaggcctggcttcagag
aaatgtgaaaggaagaagccttcaactttgtgcaatgacaatattattcttcttagtgat
gatgaaggcgatgaactgaagccaatttcagaaagggcaaaagaaaatgtttctgtaaac
cattcctcactttcagagaagctatcaatttcgcatgataggtcatgtaatgacaataaa
gattcaatcttaacttttgctgtgatcaacggagcagtaaagagtgaaaagaatgtcagt
ttgtttttgtttcctgatgaaaacaattctccatctggtcctttgcaagtgaaggatggc
tataatcaagatggtggaaaggttttgggatttaatcaatccaatggcttttgccatgca
ggtccaagcactgcaggttttggtaggaatattcagaacttctcatctaatagagacgcc
ggcaaggataacaggatggcaaatgctgggagtcagcaaccacagccatgtggcagtgga
aagcctaacattgaggatgagatgggagcaaatgccacctcaacttcagtagacaactca
agaattatggctggcagcccatcttcctcgcaaaataatttggacaggtactaccgccag
aagggtccccgcattgccaaggtagtgcgaaggatcaattgtaatgttgaacctctggaa
tttggggttgtgctttctgggaagtcatggtgcaacaaccaagcaatctttcccaaaggg
tttagaagccgagttaggtacttaagcgttttagatccaaccagtatgtgttactatgtc
tcagaaatactggatgcagggcgaaatagtcctctatttatggtttccttggagcattac
ccaaatgaggtatttattcatgtttcagcagccagatgctgggaaatggtgagagagaga
gtgaatcaggagatcacaaagcagcataaaactggaagaacgaatcttccacctttacaa
cctcctggaagtcttgatggcttcgaaatgtttgggttttcttcaccagcaattgtccag
gctgtagaagcattagatagaaatcgagtttgtacagattattgggactccaggccatat
tcacggccgcaaggacagattccacaacattctcaatccaaagccaatgcaagacattcc
cagggaacatctgaggaccaaaataacagaaaagttcctgggagccaattcttacctgcc
gaagttgatacgacacttgggggtttattcaagaaggcaagcccagaagaattgatcttg
ctgagtcgtgttttaagtgacaataaaccaacagctaatcctggtctcataacacagctt
cttaatgaagagattcacaatcgtcctagatga

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