Populus alba (white poplar): 118050650
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Entry
118050650 CDS
T07314
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
palz
Populus alba (white poplar)
Pathway
palz03015
mRNA surveillance pathway
palz04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118050650
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118050650
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
palz01009
]
118050650
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118050650
03036 Chromosome and associated proteins [BR:
palz03036
]
118050650
Protein phosphatases and associated proteins [BR:
palz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
118050650
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
118050650
Chromosome and associated proteins [BR:
palz03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
118050650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
DUF4187
DUF929
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
118050650
NCBI-ProteinID:
XP_034916944
LinkDB
All DBs
Position
19:7383345..7391790
Genome browser
AA seq
538 aa
AA seq
DB search
METTTSDVVMLDAELLQLPEISPLAFKSYPHFPQTLFDQWLSLPDPNKLVTSLVNDAKTG
APLNVSGNSSSANAATVNSLPSMFPAGSTPPLSPRSSTGSPRVTKQRPGPSNLGSPLKVV
SEPVKELIPQFYFQNGRPTPNELKEQCLIRINHFFYGRLDGLQIHEFKSVTKEVCKLPSF
FSTVLFRRIDVNSTDFVTRDAFLDYWINGNMLTLDIATQIFTILKQPDLKYLTQEDFKPV
LQELLATHPGLEFLQSTPEFQERYAETVIYRIFYYINRSGNGNLTLRELKRGNLIDAMQH
ADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRVFS
QVARKFTSKTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTRNEMQFFYE
EQLHRMECMAQEPVLFEDILCQIIDMIGPEDESYITLRDLKGCKLSGSVFNILFNLNKFM
AFETRDPFLIRQERENPTLTDWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacgacgagcgatgttgtcatgttagatgcggagttgcttcagctaccagag
atttcgcctttagctttcaaatcttaccctcactttccccaaacactcttcgatcagtgg
ctctctcttcccgatcccaataagctggtgacatcccttgttaatgatgccaagacaggt
gctccattgaatgtctctggaaactcttctagtgcaaatgctgccactgttaattcctta
ccttccatgtttcctgcgggaagcacaccgcctctttctcccagaagttcaactggctcc
cctcgtgtgacaaagcaaaggcctggcccatctaatttaggctcgcctttgaaagtagtc
agtgagccagtaaaggagttgataccacagttttattttcaaaatggccgccccacacca
aatgaactaaaagaacaatgcttgattcggatcaatcactttttctatggccgcttggat
ggattgcaaatacatgagttcaaatcggtcacaaaggaagtatgcaagctgccatcattc
ttctccacggttctatttagaaggattgatgttaatagcaccgatttcgtgacaagggat
gcttttcttgattattggataaatggcaacatgttgacattggatatagctacccaaatt
ttcacaattttgaaacaaccagatctcaaatacctcacccaggaagactttaaacctgtg
cttcaagaactactggcaactcatccaggattggagttcttacagagcacacccgagttt
caggaaagatatgctgaaactgtaatatacagaattttttactacataaatagatctggg
aatggtaatcttaccctcagggagctgaagcgtgggaacttaattgatgcaatgcaacat
gcagatgaagaagaggacataaataaagttttgaggtacttctcttatgagcacttttat
gtgatatactgcaagttttgggagctggacacagatcatgattttcttatcgacaaagag
aaccttattagatatgggaaccatgcgcttacctaccggattgttgatagagtattttcc
caggttgctagaaaatttactagcaagactgaaggaaagatgggatatgaagattttgtg
tatttcattttgtcagaggaagacaagtcatctgagccaagtcttgagtattggttcaaa
tgcatagatttggatggaaatggaatcctgacacggaatgagatgcagttcttttatgag
gagcagttgcataggatggaatgcatggctcaggagcctgtgctttttgaagatatatta
tgccagataattgatatgattggaccagaggatgagagctatatcacccttcgtgacctc
aaaggttgtaaactttcaggaagcgttttcaacatccttttcaaccttaataaatttatg
gcttttgaaacccgtgatccatttctcattcgtcaggagcgtgagaatccaacactgaca
gactgggatcgctttgcgcatagagaatatattaggctttcaatggaagaagatgttgaa
gatgcttctaatggcagtgcagaagtttgggatgaatcactagaggctcctttctga
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