Populus alba (white poplar): 118050931
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Entry
118050931 CDS
T07314
Name
(RefSeq) uncharacterized protein
KO
K26109
nuclear exosome regulator NRDE2
Organism
palz
Populus alba (white poplar)
Brite
KEGG Orthology (KO) [BR:
palz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
palz03019
]
118050931
Messenger RNA biogenesis [BR:
palz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118050931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_Syf1_CNRKL1_N
Suf
Motif
Other DBs
NCBI-GeneID:
118050931
NCBI-ProteinID:
XP_073260987
LinkDB
All DBs
Position
15:complement(7873588..7883796)
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AA seq
1183 aa
AA seq
DB search
MEREEKAAEKTSSSPSLFPLFAAAASSSITQQQTNTPINDTVPPPPPPAWLYNTSFTTDL
SIVNDAVSSLHPPQHSDSDLEEQEEDKDDRVSNQGKDRSYQLLQEPEEEKKIEAKYSRSD
SDYSDSGRERKRTKKRRHSKKKKRDRSRDEEDARDFGSRKSNVRVWAGSGTKTTKDYYFD
THGDRDNLVYGTLYRMDVPRYKPYNSTKLDFRGLYRLNKRGPGFDRDGDIDALDTQLKSG
GRYWSSKYAAVERHKNLKRLRVLARKQPRVVVSDEFIPLSDTEMSHDGVDHPGSVLKDCL
VVEESWEDEVLRKTQEFNKLTREHPHDEKVWLDFAEFQDKVASMQPQKGARLQTLEKKIS
VLEKATELNPDNEELLLCLMKAYQSRDSSDMLIGRWEKVLMHRSGNHKLWKEYLRVVQGE
FSRFKVSDMRKMYAHAIQAVSSACSRQFRQVYQNEKPSSLDPAIVQQELGLVDIFLNLCR
LEWQAGYQELATALFQAEIEFTVFCPSLLLTEHSKLRLFEHFWNSDCPRVGEEGAVGWST
WLEKEEENRQRILKEEASHDEEGGGWTGWSEPQSKHEETTKNQENVVDNDVTADEFLEES
ENEDVKQEDDTEALLKQLGIDVDAEPSSEVKDSSTWARWSKEESLRDCNQWMPVHGKISP
SSETPDGEADEHILRAVLFEDVIEYLFSLNSQEARLSLVSQFIEFFGGDLSQWICTNSSS
WKDKLLSIEVLPDPISKNLRSLHDILDRSEGSSSSNSFELLLGITSNSSKRTDAMKFLRN
AVLLCLTAFPRNHILEEAALVAEDFSITKMDSTTPCRVLAKSLLKNDRQDVLLCGVYARR
EAVFGNIGHARRVFDLALTSVEGLPPDLRSNAPLLYFWYAETELANSSGNNQESPSRALH
ILSCLGNGVTYKPFESKPSSLQLLRAHQGFKERLKIVRSAWVRGVVDDQSLALTCSAALF
DELTIGWAAGIAVLDEAFTMVLPDRRCHSYQLEFLFNYHVRMLLRYHKQSSLSKVWDSIL
KGLQIYPSSPELFKTLLEISHLYTTPNKVRWMLDDYFHKKPSVILWLFALSFEMSQGSSQ
HRIHRLFERALENERLSNSVILWRLYIAYEIDIACNPSAAKRAFFRAIHACPWSKKLWLD
GFLKLNSILTVKELSDLQDVMRDKELNLRTDIYEILLQDEFVS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagaagaaaaagcagccgaaaaaacgtcctcgtcgccttctttattccctctc
ttcgcagcagcagcttcatcatctataactcaacaacaaactaacacacctataaatgat
acagttcctcctcctcctcctccggcatggctttacaacaccagctttactactgatctc
tccatcgtaaatgacgccgtttcctctctccacccaccgcaacactcagattcagacctc
gaagaacaagaagaagataaagacgaccgcgtttccaatcaaggaaaagaccggtcttac
cagttattacaagaaccagaagaagaaaagaaaattgaagctaaatattctcgttctgat
tcggattattcggattctggtagagagagaaagaggacaaagaaaagacgacatagcaag
aagaagaagagagatagatcgagagatgaggaggacgctagggattttggttcgaggaaa
tcaaatgttagggtttgggcgggttctggtacgaaaactactaaggattattattttgat
actcatggtgatcgcgataatttggtctatggcactctttacagaatggatgttccgagg
tacaaaccttataattcaacaaaacttgattttcgagggctttatcggctgaataagagg
ggtcctggatttgatagagatggtgatattgatgccttggatactcaattaaagtctggt
ggtcgttattggtcttccaagtatgctgcagtggaacggcataagaatttaaagcgtctt
cgtgttcttgcacgaaagcagcctagggttgtagtttcagatgaatttattcctttgtca
gatacggaaatgtctcatgatggtgttgatcatcctggttctgttttgaaggattgttta
gttgttgaagaatcctgggaagatgaggtgttgcgcaagactcaggagtttaataagtta
acaagggagcaccctcatgatgagaaagtatggttggattttgcagagttccaagacaag
gttgcgagtatgcagcctcagaaaggtgcccgtttgcagacgcttgagaagaaaattagt
gtactggaaaaggccacagagctcaaccctgacaatgaggaacttttgctctgtcttatg
aaggcttatcagagtagagacagttcagatatgctaatcggtagatgggagaaggtactc
atgcatcgttcagggaatcacaagttgtggaaagagtatttgcgcgttgttcaaggggag
ttctccagattcaaggtttcagatatgcgaaaaatgtatgcacatgcaatccaagctgta
tcttctgcatgcagcaggcagtttaggcaggtttaccaaaatgagaagccttcttctttg
gaccctgccatagtacaacaggagcttggtctggttgatatatttcttaatctttgcagg
ctcgagtggcaggctgggtatcaggagttggccactgctttatttcaggctgaaattgaa
tttactgtgttttgtccttcgttacttttaactgaacatagcaaactcaggctgtttgag
cacttctggaatagtgattgtccaagagttggagaagaaggggccgttgggtggtccact
tggttggagaaagaggaggaaaataggcaaaggattttgaaagaggaggcttcacatgat
gaagaaggaggtggttggaccggctggtcagaaccgcaatccaaacatgaggaaactact
aagaaccaagaaaatgtagtcgataatgatgtgactgctgatgagtttctagaggaatct
gagaatgaggatgtcaagcaggaagatgatactgaagcattgctaaaacagcttggcatt
gatgtggatgctgagcctagtagtgaggttaaagacagctcaacttgggctaggtggtct
aaagaagagtccttgagagattgtaatcaatggatgcctgttcatggcaagatctctccc
agtagtgagacccctgatggagaagctgatgaacatatcctaagagctgtattatttgaa
gatgtcattgagtacctattctctttaaactctcaagaggcccgcttatctctagtatct
caatttattgaattctttggtggggacctgtcgcaatggatttgcacaaacagttcaagt
tggaaggacaaactcctgagcattgaggtgttgccagatcctatatcaaagaacttgaga
agccttcatgatattttggacagatcagaaggcagttcaagctctaacagttttgagtta
ctgttgggtatcaccagtaacagctctaagaggactgatgcaatgaaatttcttcgaaat
gctgtattactttgcttaacagcttttccacgtaatcacatattagaagaagctgctctt
gtcgctgaagatttttccattacgaaaatggattctactaccccatgtcgtgtgctggca
aagtccctgttaaagaatgatcgtcaggatgttttgctatgtggagtttatgcacggaga
gaagctgtttttggtaatattggtcatgcaagaagagtctttgacttggcattgacatct
gttgaagggcttccgcctgatttacgatctaatgccccgcttttatatttctggtatgcc
gagacagaacttgccaatagttctggaaataatcaagaatcaccttctcgtgctttgcat
attttatcctgcttaggaaatggagtaacgtacaaaccatttgaatctaaaccgtcaagc
ctgcaattattgagagcacaccaggggtttaaagaaaggttgaaaatagtacgatcagca
tgggtgcgcggtgttgtagatgatcaatctcttgctctaacttgctcagcagctttattt
gatgaattgacgattggatgggctgcaggtattgcagttttagacgaggcgttcacaatg
gtgcttccagatagaagatgccacagttaccaacttgagtttttgttcaactatcatgta
aggatgcttttaagatatcataagcaatcaagtttatcaaaagtctgggactccatcttg
aaggggctgcaaatatatccctccagccctgaactatttaagaccttattggagatcagc
catctttatacaacacccaataaagtgcgctggatgcttgatgactacttccacaagaaa
ccatctgtaattctttggctttttgcgctatcatttgagatgagtcagggaagctcccag
catagaatccataggttatttgaaagagcattagaaaatgagagattgagcaactcagtc
atactctggcgtttgtacattgcttatgaaattgacatagcgtgcaatccttcagcagcc
aagcgcgctttcttccgagctattcacgcctgtccatggtcaaaaaaattatggcttgat
ggttttctcaagttgaactccatcctaactgtgaaagagttgtcagatctccaagacgta
atgcgggataaggagttgaatcttagaactgatatttacgagattcttctgcaagatgag
tttgtatcatga
DBGET
integrated database retrieval system
